clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF019G02 | Sequence | 477 | 002257 (14) | ref|XP_009795964.1| | 3e-74 | PREDICTED: eukaryotic translation initiation factor 3 subunit M-like [Nicotiana | 736 | 002257 (14) | ref|XP_002280247.1| | 5e-96 | PREDICTED: eukaryotic translation initiation factor 3 subunit M [Vitis vinifera |
JMFF032O02 | Sequence | 578 | 002257 (14) | ref|XP_009795964.1| | 2e-90 | PREDICTED: eukaryotic translation initiation factor 3 subunit M-like [Nicotiana | 768 | 002257 (14) | ref|XP_002280247.1| | 2e-118 | PREDICTED: eukaryotic translation initiation factor 3 subunit M [Vitis vinifera |
JMSF022I02 | Sequence | 647 | 002257 (14) | ref|XP_009795964.1| | 2e-103 | PREDICTED: eukaryotic translation initiation factor 3 subunit M-like [Nicotiana | 757 | 002257 (14) | ref|XP_002280247.1| | 1e-115 | PREDICTED: eukaryotic translation initiation factor 3 subunit M [Vitis vinifera |
JMSF034H18 | Sequence | 658 | 002257 (14) | ref|XP_009795964.1| | 6e-105 | PREDICTED: eukaryotic translation initiation factor 3 subunit M-like [Nicotiana | 672 | 002257 (14) | gb|KHG09919.1| | 255 | Eukaryotic translation initiation factor 3 subunit M [Gossypium arboreum] |
JMSF053A23 | Sequence | 596 | 002257 (14) | ref|XP_009795964.1| | 2e-93 | PREDICTED: eukaryotic translation initiation factor 3 subunit M-like [Nicotiana | 821 | 002257 (14) | ref|XP_002280247.1| | 1e-103 | PREDICTED: eukaryotic translation initiation factor 3 subunit M [Vitis vinifera |
JMSF053I19 | Sequence | 661 | 002257 (14) | ref|XP_009795964.1| | 2e-93 | PREDICTED: eukaryotic translation initiation factor 3 subunit M-like [Nicotiana | 930 | 002257 (14) | ref|XP_002280247.1| | 6e-132 | PREDICTED: eukaryotic translation initiation factor 3 subunit M [Vitis vinifera |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002257============================================1600 70 ---------------------------------------->JMSF034H18 <-----------------------------------------rJMSF034H18 93 ------------------------------------>JMSF053A23 <-------------------------------------------------rJMSF053A23 96 ---------------------------------------->JMSF053I19 <---------------------------------------------------------rJMSF053I19 116 ----------------------------->JMFF019G02 <---------------------------------------------rJMFF019G02 162 ----------------------------------->JMFF032O02 <------------------------------------rJMFF032O02 173 --------------------------------------->JMSF022I02 <-----------------------------------rJMSF022I02
The following clones don't have the opposite end in this pair.
----------->JMSF016H17* ---------------------------------------->JMSF025K04#