List of clones in pair P009639.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005H18Sequence417013854 (32)gb|AEA86283.1|5e-63stem-specific protein TSJT1-like protein [Solanum nigrum]707013854 (32)ref|XP_009787328.1|3e-99PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMFF008P10Sequence446013854 (32)ref|XP_009621189.1|3e-49PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]741013854 (32)ref|XP_009787328.1|2e-73PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMFF011P21Sequence603013854 (32)ref|XP_009621189.1|3e-103PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]720013854 (32)ref|XP_009787328.1|2e-73PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMFF012H21Sequence618013854 (32)ref|XP_009621189.1|1e-92PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]765013854 (32)ref|XP_009787328.1|4e-115PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMFF014F02Sequence601013854 (32)ref|XP_009621189.1|4e-104PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]673013854 (32)ref|XP_009787328.1|9e-74PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMFF014H23Sequence527013854 (32)ref|XP_009621189.1|6e-86PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]812013854 (32)ref|XP_009787328.1|4e-97PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMFF020D19Sequence584013854 (32)ref|XP_009621189.1|2e-100PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]662013854 (32)ref|XP_009787328.1|7e-74PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMFF022H21Sequence525013854 (32)ref|XP_009621189.1|6e-86PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]713013854 (32)ref|XP_009787328.1|2e-74PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMFF023H15Sequence528013854 (32)ref|XP_009621189.1|9e-86PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]721013854 (32)ref|XP_009787328.1|2e-73PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMFF030N14Sequence503013854 (32)gb|AEA86283.1|1e-81stem-specific protein TSJT1-like protein [Solanum nigrum]683013854 (32)ref|XP_009787328.1|1e-73PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMFF041F08Sequence660013854 (32)ref|XP_009621189.1|7e-116PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]601013854 (32)ref|XP_009621189.1|3e-40PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]
JMFF049N09Sequence648013854 (32)ref|XP_009621189.1|5e-111PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]545013854 (32)ref|XP_004497989.1|6e-23PREDICTED: stem-specific protein TSJT1-like [Cicer arietinum]
JMSF010E06Sequence420013854 (32)gb|AEA86283.1|5e-63stem-specific protein TSJT1-like protein [Solanum nigrum]755013854 (32)gb|AFK42935.1|5e-84unknown [Lotus japonicus]
JMSF033B10Sequence663013854 (32)ref|XP_009621189.1|4e-101PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]770013854 (32)ref|XP_009787328.1|2e-91PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMSF039H14Sequence695013854 (32)ref|XP_009621189.1|4e-127PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]871013854 (32)ref|XP_009787328.1|1e-121PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]
JMSF050L19Sequence670013854 (32)ref|XP_009621189.1|4e-121PREDICTED: stem-specific protein TSJT1-like [Nicotiana tomentosiformis]796013854 (32)ref|XP_009787328.1|2e-95PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]

Contig 13854 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig013854============================================1285         
  72       ------------------------------------------------>JMFF049N09                                                
                                                               <-----------------------------------------rJMFF049N09  
  72 --------------------------------------------------->JMSF033B10                                                   
                                       <-----------------------------------------------------------rJMSF033B10  
 104      ---------------------------------->JMFF008P10                                                               
                                            <---------------------------------------------------------rJMFF008P10  
 104      -------------------------------------------------->JMFF041F08                                               
                                                        <---------------------------------------------rJMFF041F08  
 124       ---------------------------------------->JMFF023H15                                                        
                                             <-------------------------------------------------------rJMFF023H15  
 124       ---------------------------------------------->JMFF011P21                                                  
                                             <-------------------------------------------------------rJMFF011P21  
 126       ---------------------------------------->JMFF014H23                                                        
                                      <--------------------------------------------------------------rJMFF014H23  
 138       ---------------------------------------->JMFF022H21                                                        
                                            <-------------------------------------------------------rJMFF022H21  
 144       --------------------------------------------------->JMSF050L19                                             
                                     <-------------------------------------------------------------rJMSF050L19  
 162       -------------------------------------->JMFF030N14                                                          
                                             <----------------------------------------------------rJMFF030N14  
 174       ----------------------------------------------------->JMSF039H14                                           
                               <-----------------------------------------------------------------rJMSF039H14  
 190       ---------------------------------------------->JMFF014F02                                                  
                                            <---------------------------------------------------rJMFF014F02  
 196        -------------------------------------------->JMFF020D19                                                   
                                             <--------------------------------------------------rJMFF020D19  
 232      -------------------------------->JMFF005H18                                                                 
                                     <------------------------------------------------------rJMFF005H18  
 234       ----------------------------------------------->JMFF012H21                                                 
                                <-----------------------------------------------------------rJMFF012H21  
 270      -------------------------------->JMSF010E06                                                                 
                               <----------------------------------------------------------rJMSF010E06

The following clones don't have the opposite end in this pair.