| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF001H16 | Sequence | 531 | 001700 (38) | ref|XP_006363155.1| | 232 | PREDICTED: uncharacterized protein LOC102588654 [Solanum tuberosum] | 743 | 001700 (38) | ref|NP_001056566.2| | 6e-05 | Os06g0107000 [Oryza sativa Japonica Group] dbj|BAD67713.1| unknown protein [Oryz |
| JMFF004K06 | Sequence | 589 | 001700 (38) | ref|XP_004232611.1| | 2e-74 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | 769 | 001700 (38) | |||
| JMFF005B10 | Sequence | 468 | 001700 (38) | ref|XP_006363155.1| | 208 | PREDICTED: uncharacterized protein LOC102588654 [Solanum tuberosum] | 743 | 001700 (38) | |||
| JMFF007J02 | Sequence | 530 | 001700 (38) | ref|XP_004232611.1| | 1e-73 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | 743 | 001700 (38) | |||
| JMFF013D11 | Sequence | 563 | 001700 (38) | ref|XP_004232611.1| | 1e-74 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | 743 | 001700 (38) | |||
| JMFF024N09 | Sequence | 529 | 001700 (38) | ref|XP_006363155.1| | 233 | PREDICTED: uncharacterized protein LOC102588654 [Solanum tuberosum] | 766 | 001700 (38) | |||
| JMFF028D09 | Sequence | 534 | 001700 (38) | ref|XP_004232611.1| | 3e-73 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | |||||
| JMFF031B22 | Sequence | 520 | 001700 (38) | ref|XP_006363155.1| | 231 | PREDICTED: uncharacterized protein LOC102588654 [Solanum tuberosum] | 753 | 001700 (38) | |||
| JMFF032M02 | Sequence | 539 | 001700 (38) | ||||||||
| JMFF044I24 | Sequence | 647 | 001700 (38) | ref|XP_004232611.1| | 5e-74 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | 429 | 001700 (38) | |||
| JMFF045G24 | Sequence | 647 | 001700 (38) | 642 | 001700 (38) | ||||||
| JMFF046N02 | Sequence | 502 | 001700 (38) | ref|XP_006363155.1| | 219 | PREDICTED: uncharacterized protein LOC102588654 [Solanum tuberosum] | 424 | 001700 (38) | |||
| JMFF047M13 | Sequence | 506 | 001700 (38) | ref|XP_004232611.1| | 1e-72 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | 258 | 001700 (38) | |||
| JMFN004P14 | Sequence | 642 | 001700 (38) | ref|XP_004232611.1| | 4e-74 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | |||||
| JMFN011P19 | Sequence | 622 | 001700 (38) | ref|XP_004232611.1| | 3e-74 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | |||||
| JMFN014A24 | Sequence | 626 | 001700 (38) | ||||||||
| JMFN017G15 | Sequence | 611 | 001700 (38) | ref|XP_006363155.1| | 212 | PREDICTED: uncharacterized protein LOC102588654 [Solanum tuberosum] | |||||
| JMFN044F02 | Sequence | 605 | 001700 (38) | ref|XP_004232611.1| | 4e-74 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | |||||
| JMFS027H07 | Sequence | 556 | 001700 (38) | ref|XP_004232611.1| | 2e-74 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | |||||
| JMFS035C06 | Sequence | 627 | 001700 (38) | ref|XP_004232611.1| | 5e-74 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | |||||
| JMSF025B19 | Sequence | 637 | 001700 (38) | ref|XP_004232611.1| | 5e-74 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | 719 | 001700 (38) | |||
| JMSF025C21 | Sequence | 650 | 001700 (38) | ref|XP_004232611.1| | 5e-74 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | 712 | 001700 (38) | |||
| JMSF030I13 | Sequence | 546 | 001700 (38) | ||||||||
| JMSF045P13 | Sequence | 756 | 001700 (38) | ref|XP_004232611.1| | 1e-73 | PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum] | 687 | 001700 (38) | |||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig001700============================================1438 6 ---------------------------------------------------->JMSF045P13 <-----------------------------------------------rJMSF045P13 203 ---------------------------------------->JMFF004K06 <-----------------------------------------------------rJMFF004K06 205 ------------------------------------>JMFF024N09 <----------------------------------------------------rJMFF024N09 208 -------------------------------------->JMFF013D11 <---------------------------------------------------rJMFF013D11 219 ---------------------------------->JMFF047M13 <-----------------rJMFF047M13 226 ----------------------------------->JMFF031B22 <---------------------------------------------------rJMFF031B22 229 -------------------------------->JMFF005B10 <---------------------------------------------------rJMFF005B10 234 ------------------------------------>JMFF007J02 <---------------------------------------------------rJMFF007J02 249 ---------------------------------->JMFF046N02 <----------------------rJMFF046N02 254 -------------------------------------------->JMFF044I24 <----------------------rJMFF044I24 256 ------------------------------------>JMFF001H16 <---------------------------------------------------rJMFF001H16 260 ------------------------------------------->JMSF025B19 <-------------------------------------------------rJMSF025B19 269 -------------------------------------------->JMSF025C21 <------------------------------------------------rJMSF025C21 763 -------------------------------------------->JMFF045G24 <------------------------------------------rJMFF045G24
The following clones don't have the opposite end in this pair.
-------------------------------------------->JMFN004P14- <------------------------------------rJMFF032M02- ----------------------------------------->JMFN044F02- ------------------------------------------>JMFN017G15- ------------------------------------>JMFF028D09- -------------------------------------->JMFS027H07- ------------------------------------------>JMFN011P19- <-------------------------------------rJMSF030I13- ------------------------------------------>JMFN014A24- ------------------------------------------>JMFS035C06-