clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005F20 | Sequence | 469 | 010706 (41) | ref|XP_006365701.1| | 1e-69 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] | 682 | 010706 (41) | ref|XP_004236746.1| | 288 | PREDICTED: triosephosphate isomerase, cytosolic [Solanum lycopersicum] |
JMFF020J14 | Sequence | 476 | 010706 (41) | ref|XP_010111131.1| | 1e-68 | Triosephosphate isomerase [Morus notabilis] gb|EXC30496.1| Triosephosphate isome | 673 | 010706 (41) | ref|XP_006365701.1| | 1e-92 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] |
JMFF029G18 | Sequence | 577 | 010706 (41) | emb|CDP00096.1| | 2e-93 | unnamed protein product [Coffea canephora] | 118 | 010706 (41) | |||
JMFF031N23 | Sequence | 614 | 010706 (41) | emb|CDP00096.1| | 1e-100 | unnamed protein product [Coffea canephora] | 682 | 010706 (41) | ref|XP_004236746.1| | 290 | PREDICTED: triosephosphate isomerase, cytosolic [Solanum lycopersicum] |
JMFF031P08 | Sequence | 481 | 010706 (41) | ref|XP_010111131.1| | 2e-68 | Triosephosphate isomerase [Morus notabilis] gb|EXC30496.1| Triosephosphate isome | 682 | 010706 (41) | ref|XP_004236746.1| | 290 | PREDICTED: triosephosphate isomerase, cytosolic [Solanum lycopersicum] |
JMFF032D19 | Sequence | 473 | 010706 (41) | ref|XP_010111131.1| | 8e-69 | Triosephosphate isomerase [Morus notabilis] gb|EXC30496.1| Triosephosphate isome | 572 | 010706 (41) | ref|XP_010690624.1| | 226 | PREDICTED: triosephosphate isomerase, cytosolic [Beta vulgaris subsp. vulgaris] |
JMFF037O21 | Sequence | 525 | 010706 (41) | ref|XP_010111131.1| | 2e-78 | Triosephosphate isomerase [Morus notabilis] gb|EXC30496.1| Triosephosphate isome | 600 | 010706 (41) | ref|XP_006365701.1| | 1e-88 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] |
JMFF041E16 | Sequence | 642 | 010706 (41) | emb|CDP00096.1| | 3e-104 | unnamed protein product [Coffea canephora] | 614 | 010706 (41) | ref|XP_010690624.1| | 233 | PREDICTED: triosephosphate isomerase, cytosolic [Beta vulgaris subsp. vulgaris] |
JMFF047G10 | Sequence | 394 | 010706 (41) | ref|XP_010111131.1| | 3e-44 | Triosephosphate isomerase [Morus notabilis] gb|EXC30496.1| Triosephosphate isome | 345 | 010706 (41) | gb|EYU19908.1| | 2e-26 | hypothetical protein MIMGU_mgv1a012309mg [Erythranthe guttata] |
JMFN019P04 | Sequence | 641 | 010706 (41) | emb|CDP00096.1| | 3e-109 | unnamed protein product [Coffea canephora] | |||||
JMFN032M05 | Sequence | 643 | 010706 (41) | emb|CDP00096.1| | 2e-102 | unnamed protein product [Coffea canephora] | |||||
JMFN039A01 | Sequence | 621 | 010706 (41) | ref|XP_010690624.1| | 211 | PREDICTED: triosephosphate isomerase, cytosolic [Beta vulgaris subsp. vulgaris] | |||||
JMFN043K17 | Sequence | 644 | 010706 (41) | emb|CDP00096.1| | 9e-110 | unnamed protein product [Coffea canephora] | |||||
JMFS116D06 | Sequence | 574 | 010706 (41) | emb|CDP00096.1| | 4e-88 | unnamed protein product [Coffea canephora] | |||||
JMSF013D03 | Sequence | 345 | 010706 (41) | ref|XP_011077218.1| | 135 | PREDICTED: triosephosphate isomerase, cytosolic [Sesamum indicum] | 679 | 010706 (41) | ref|XP_004236746.1| | 291 | PREDICTED: triosephosphate isomerase, cytosolic [Solanum lycopersicum] |
JMSF019C02 | Sequence | 382 | 010706 (41) | ref|XP_010111131.1| | 1e-45 | Triosephosphate isomerase [Morus notabilis] gb|EXC30496.1| Triosephosphate isome | 766 | 010706 (41) | ref|XP_006365701.1| | 6e-113 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] |
JMSF023H07 | Sequence | 678 | 010706 (41) | ref|XP_006365701.1| | 9e-114 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] | 736 | 010706 (41) | emb|CDP00096.1| | 2e-111 | unnamed protein product [Coffea canephora] |
JMSF023J07 | Sequence | 662 | 010706 (41) | emb|CDP00096.1| | 2e-105 | unnamed protein product [Coffea canephora] | 769 | 010706 (41) | ref|XP_006365701.1| | 2e-111 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] |
JMSF029M04 | Sequence | 670 | 010706 (41) | ref|XP_006365701.1| | 9e-114 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] | 725 | 010706 (41) | ref|XP_006365701.1| | 1e-106 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] |
JMSF039J22 | Sequence | 711 | 010706 (41) | ref|XP_006365701.1| | 3e-113 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] | 771 | 010706 (41) | ref|XP_006365701.1| | 3e-120 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] |
JMSF040J22 | Sequence | 720 | 010706 (41) | emb|CDP00096.1| | 2e-122 | unnamed protein product [Coffea canephora] | 409 | 010706 (41) | ref|XP_010922321.1| | 1e-74 | PREDICTED: triosephosphate isomerase, cytosolic isoform X2 [Elaeis guineensis] |
JMSF044P17 | Sequence | 766 | 010706 (41) | ref|XP_006365701.1| | 7e-134 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] | 642 | 010706 (41) | ref|XP_010690624.1| | 256 | PREDICTED: triosephosphate isomerase, cytosolic [Beta vulgaris subsp. vulgaris] |
JMSF049J10 | Sequence | 717 | 010706 (41) | ref|XP_006365701.1| | 3e-121 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] | 769 | 010706 (41) | ref|XP_006365701.1| | 3e-113 | PREDICTED: triosephosphate isomerase, cytosolic-like [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010706============================================1124 61 -------------------------------------------------------->JMFF041E16 <------------------------------------------------------rJMFF041E16 77 ---------------------------------------------------------->JMSF023J07 <--------------------------------------------------------------------rJMSF023J07 83 ----------------------------------------->JMFF031P08 <------------------------------------------------------------rJMFF031P08 89 ----------------------------------------->JMFF020J14 <-----------------------------------------------------------rJMFF020J14 93 ------------------------------>JMSF013D03 <-----------------------------------------------------------rJMSF013D03 94 ----------------------------------------->JMFF005F20 <------------------------------------------------------------rJMFF005F20 94 -------------------------------------------------->JMFF029G18 <---------rJMFF029G18 99 ----------------------------------------------------->JMFF031N23 <------------------------------------------------------------rJMFF031N23 109 --------------------------------------------------------------->JMSF049J10 <----------------------------------------------------------------rJMSF049J10 110 ---------------------------------------------------------->JMSF029M04 <----------------------------------------------------------------rJMSF029M04 112 ------------------------------------------------------------------->JMSF044P17 <----------------------------------------------------rJMSF044P17 113 --------------------------------->JMSF019C02 <-----------------------------------------------------------------rJMSF019C02 122 ----------------------------------------->JMFF032D19 <--------------------------------------------------rJMFF032D19 123 --------------------------------->JMFF047G10 <------------------------------rJMFF047G10 123 -------------------------------------------------------------->JMSF039J22 <------------------------------------------------------------------rJMSF039J22 129 ----------------------------------------------------------->JMSF023H07 <---------------------------------------------------------------rJMSF023H07 145 --------------------------------------------->JMFF037O21 <-----------------------------------------------------rJMFF037O21 455 --------------------------------------------------------------->JMSF040J22 <-----------------------------------rJMSF040J22
The following clones don't have the opposite end in this pair.
<-------------------------------------------------------JMFN039A01- -------------------------------------------------->JMFS116D06- ------------------------------------------------------->JMFN019P04- ------------------------------------------------------>JMFN032M05- ------------------------------------------------------->JMFN043K17-