List of clones in pair P009563.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001K16Sequence560004267 (52)ref|XP_004230256.1|2e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]692004267 (52)ref|XP_004230256.1|4e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF004O19Sequence282004267 (52)250004267 (52)
JMFF005K24Sequence429004267 (52)ref|XP_002512449.1|7e-25conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot692004267 (52)ref|XP_004230256.1|4e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF009G14Sequence301004267 (52)ref|XP_002512449.1|5e-23conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot582004267 (52)ref|XP_004230256.1|2e-06PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF013A09Sequence199004267 (52)ref|XP_002512449.1|1e-13conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot734004267 (52)ref|XP_004230256.1|6e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF013I24Sequence450004267 (52)ref|XP_002512449.1|1e-24conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot689004267 (52)ref|XP_004230256.1|3e-15PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF015A05Sequence447004267 (52)ref|XP_002512449.1|1e-24conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot690004267 (52)ref|XP_004230256.1|3e-15PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF017N14Sequence555004267 (52)ref|XP_004230256.1|2e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]695004267 (52)ref|XP_002512449.1|2e-23conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot
JMFF020G02Sequence391004267 (52)ref|XP_002512449.1|7e-25conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot693004267 (52)ref|XP_004230256.1|4e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF020P21Sequence554004267 (52)ref|XP_004230256.1|2e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]704004267 (52)ref|XP_004230256.1|5e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF021N20Sequence451004267 (52)ref|XP_002512449.1|1e-24conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot698004267 (52)ref|XP_004230256.1|4e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF026J11Sequence451004267 (52)ref|XP_002512449.1|1e-24conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot693004267 (52)ref|XP_004230256.1|4e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF033E04Sequence534004267 (52)ref|XP_004230256.1|1e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]692004267 (52)ref|XP_004230256.1|4e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF036A11Sequence412004267 (52)ref|XP_004230256.1|9e-17PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]607004267 (52)ref|XP_004230256.1|4e-06PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF039B16Sequence439004267 (52)ref|XP_004230256.1|2e-32PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]739004267 (52)ref|XP_004230256.1|6e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF041O18Sequence631004267 (52)ref|XP_004230256.1|3e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]618004267 (52)ref|XP_004230256.1|7e-08PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF044G20Sequence622004267 (52)ref|XP_004230256.1|3e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]659004267 (52)ref|XP_004230256.1|4e-04PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF045P23Sequence623004267 (52)ref|XP_004230256.1|3e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]516004267 (52)
JMFF049L12Sequence577004267 (52)ref|XP_004230256.1|2e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]630004267 (52)ref|XP_004230256.1|2e-04PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFF050H24Sequence546004267 (52)ref|XP_002512449.1|1e-23conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot301004267 (52)
JMFN002H05Sequence556004267 (52)ref|XP_004230256.1|2e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFN009I05Sequence619004267 (52)ref|XP_004230256.1|3e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFN025F04Sequence531004267 (52)ref|XP_004230256.1|1e-40PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMFN034M23Sequence584004267 (52)
JMFN037B10Sequence239004267 (52)ref|XP_002512449.1|9e-15conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot
JMFN037G15Sequence577004267 (52)ref|XP_004230256.1|2e-04PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMSF006E08Sequence379004267 (52)ref|XP_002512449.1|5e-25conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot
JMSF008J15Sequence352004267 (52)ref|XP_002512449.1|4e-25conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot699004267 (52)ref|XP_004230256.1|6e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
JMSF012F03Sequence227004267 (52)ref|XP_002512449.1|4e-16conserved hypothetical protein [Ricinus communis] gb|EEF49901.1| conserved hypot788004267 (52)ref|XP_004230256.1|8e-26PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]

Contig 4267 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004267============================================ 872         
   8  ---------------------------------------------------------------------->JMFF044G20                               
                             <---------------------------------------------------------------------------rJMFF044G20  
  52 --------------------------------------------------->JMFF013I24                                                   
                    <------------------------------------------------------------------------------rJMFF013I24  
  58  -------------------------------------------------->JMFF015A05                                                   
                    <------------------------------------------------------------------------------rJMFF015A05  
  66 ---------------------->JMFF013A09                                                                                
              <-----------------------------------------------------------------------------------rJMFF013A09  
  66 ------------------------------------------------->JMFF039B16                                                     
             <-----------------------------------------------------------------------------------rJMFF039B16  
  76  ----------------------------------------------------------------->JMFF049L12                                    
                            <--------------------------------------------------------------------rJMFF049L12  
  76 ------------------------->JMSF012F03                                                                             
      <------------------------------------------------------------------------------------------rJMSF012F03  
  78  ---------------------------------------------------------------->JMFF050H24                                     
                                                              <---------------------------------rJMFF050H24  
  89  ------------------------------------------------------------------------>JMFF041O18                             
                        <----------------------------------------------------------------------rJMFF041O18  
  95 --------------------------------------------------------------->JMFF020P21                                       
             <--------------------------------------------------------------------------------rJMFF020P21  
 103  ----------------------------------------------------------------------->JMFF045P23                              
                                  <----------------------------------------------------------rJMFF045P23  
 104 ---------------------------------->JMFF009G14                                                                    
                          <------------------------------------------------------------------rJMFF009G14  
 105 -------------------------------------------->JMFF020G02                                                          
             <-------------------------------------------------------------------------------rJMFF020G02  
 105 --------------------------------------------------->JMFF021N20                                                   
             <-------------------------------------------------------------------------------rJMFF021N20  
 105 --------------------------------------------------->JMFF026J11                                                   
             <-------------------------------------------------------------------------------rJMFF026J11  
 105 ------------------------------------------------------------>JMFF033E04                                          
             <-------------------------------------------------------------------------------rJMFF033E04  
 105 --------------------------------------------------------------->JMFF017N14                                       
             <-------------------------------------------------------------------------------rJMFF017N14  
 107 --------------------------------------------------------------->JMFF001K16                                       
             <-------------------------------------------------------------------------------rJMFF001K16  
 115  ------------------------------------------------>JMFF005K24                                                     
             <-------------------------------------------------------------------------------rJMFF005K24  
 122 ---------------------------------------------->JMFF036A11                                                        
                     <---------------------------------------------------------------------rJMFF036A11  
 171 --------------------------------------->JMSF008J15                                                               
     <-------------------------------------------------------------------------------rJMSF008J15  
 638                                                                   ---------------------------->JMFF004O19        
                                                                       <--------------------------rJMFF004O19

The following clones don't have the opposite end in this pair.

                                     <--------------------------------------------------------------JMFN034M23-       
         ------------------------------------------------------------>JMFN025F04-                                     
     <------------------------------------------------------------------------------------rJMSF024D08*                
        --------------------------------------------------------------->JMFN002H05-                                   
             ----------------------->JMFN037B10-                                                                      
                              ----------------------------------------------------------------->JMFN037G15-           
       ---------------------------------------------------------------------->JMFN009I05-                             
     ------------------------------------------>JMSF006E08-