clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF008E24 | Sequence | 544 | 007195 (12) | ref|XP_006338470.1| | 5e-70 | PREDICTED: aldose 1-epimerase-like isoform X2 [Solanum tuberosum] | 628 | 007195 (12) | ref|XP_007216505.1| | 5e-33 | hypothetical protein PRUPE_ppa024124mg [Prunus persica] gb|EMJ17704.1| hypotheti |
JMSF011C22 | Sequence | 304 | 007195 (12) | emb|CDP18771.1| | 2e-25 | unnamed protein product [Coffea canephora] | 732 | 007195 (12) | ref|XP_009624450.1| | 2e-86 | PREDICTED: aldose 1-epimerase-like isoform X2 [Nicotiana tomentosiformis] |
JMSF012P03 | Sequence | 487 | 007195 (12) | ref|XP_006338470.1| | 2e-58 | PREDICTED: aldose 1-epimerase-like isoform X2 [Solanum tuberosum] | |||||
JMSF018N03 | Sequence | 424 | 007195 (12) | gb|KDP45491.1| | 3e-49 | hypothetical protein JCGZ_09740 [Jatropha curcas] | 759 | 007195 (12) | ref|XP_009624451.1| | 3e-83 | PREDICTED: aldose 1-epimerase-like [Nicotiana tomentosiformis] |
JMSF019D05 | Sequence | 142 | 007195 (12) | ||||||||
JMSF037K21 | Sequence | 666 | 007195 (12) | ref|XP_006338470.1| | 2e-94 | PREDICTED: aldose 1-epimerase-like isoform X2 [Solanum tuberosum] | 688 | 007195 (12) | ref|XP_009624449.1| | 2e-71 | PREDICTED: aldose 1-epimerase-like isoform X1 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007195============================================2172 827 ------------------------>JMFF008E24 <----------------------------rJMFF008E24 885 ------------------>JMSF018N03 <----------------------------------rJMSF018N03 885 ------------------------------>JMSF037K21 <------------------------------rJMSF037K21 911 ------------->JMSF011C22 <---------------------------------rJMSF011C22
The following clones don't have the opposite end in this pair.
<---------------------------------rJMSF049C14* --------------------->JMSF012P03- <------rJMSF019D05- ---------------------------------------->rJMSF039P11*