List of clones in pair P009486.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008C23Sequence178008154 (24)dbj|BAF46857.1|6e-15translationally controlled tumor protein [Ipomoea nil]677008154 (24)emb|CDO98860.1|8e-87unnamed protein product [Coffea canephora]
JMFF010I07Sequence654008154 (24)emb|CDO98860.1|1e-61unnamed protein product [Coffea canephora]
JMFF022P09Sequence679008154 (24)emb|CDO98860.1|9e-87unnamed protein product [Coffea canephora]
JMFF038G06Sequence553008154 (24)emb|CDO98860.1|1e-80unnamed protein product [Coffea canephora]702008154 (24)emb|CDO98860.1|2e-85unnamed protein product [Coffea canephora]
JMFF046K10Sequence557008154 (24)emb|CDO98860.1|3e-61unnamed protein product [Coffea canephora]594008154 (24)emb|CDO98860.1|5e-54unnamed protein product [Coffea canephora]
JMFF048M10Sequence313008154 (24)ref|XP_002516930.1|2e-28Translationally-controlled tumor protein, putative [Ricinus communis] gb|EEF4554269008154 (24)dbj|BAF46857.1|9e-15translationally controlled tumor protein [Ipomoea nil]
JMFF051J13Sequence608008154 (24)emb|CDO98860.1|5e-87unnamed protein product [Coffea canephora]596008154 (24)emb|CDO98860.1|2e-64unnamed protein product [Coffea canephora]
JMFN003C15Sequence243008154 (24)
JMFN005E15Sequence615008154 (24)emb|CDO98860.1|4e-87unnamed protein product [Coffea canephora]
JMFN008N19Sequence610008154 (24)emb|CDO98860.1|6e-87unnamed protein product [Coffea canephora]
JMFN017F15Sequence130008154 (24)dbj|BAF46857.1|3e-09translationally controlled tumor protein [Ipomoea nil]
JMFN017K22Sequence583008154 (24)emb|CDO98860.1|3e-87unnamed protein product [Coffea canephora]
JMFN028E10Sequence617008154 (24)emb|CDO98860.1|4e-87unnamed protein product [Coffea canephora]
JMFN030A18Sequence578008154 (24)emb|CDO98860.1|1e-87unnamed protein product [Coffea canephora]
JMFN039J02Sequence614008154 (24)emb|CDO98860.1|1e-86unnamed protein product [Coffea canephora]
JMFN039P03Sequence622008154 (24)emb|CDO98860.1|4e-87unnamed protein product [Coffea canephora]
JMFN040H17Sequence620008154 (24)emb|CDO98860.1|9e-87unnamed protein product [Coffea canephora]
JMFN042P03Sequence606008154 (24)emb|CDO98860.1|7e-87unnamed protein product [Coffea canephora]
JMFN044A09Sequence615008154 (24)emb|CDO98860.1|2e-86unnamed protein product [Coffea canephora]

Contig 8154 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig008154============================================ 784         
  58  --------------------------------------->JMFF048M10                                                              
                                                                <---------------------------------rJMFF048M10  
  58  ---------------------------------------------------------------------->JMFF046K10                               
                      <---------------------------------------------------------------------------rJMFF046K10  
  64  ----------------------------------------------------------------------------->JMFF051J13                        
                          <-----------------------------------------------------------------------rJMFF051J13  
  90 ---------------------------------------------------------------------->JMFF038G06                                
     <----------------------------------------------------------------------------------------rJMFF038G06  
 108 ---------------------->JMFF008C23                                                                                
     <-------------------------------------------------------------------------------------rJMFF008C23

The following clones don't have the opposite end in this pair.

        ----------------------------------------------------------------------------->JMFN039J02-                     
       ---------------------------------------------------------------------------->JMFN042P03-                       
                                                                          <------------------------------JMFN003C15-  
            ------------------------------------------------------------------------------>JMFN040H17-                
              <----------------------------------------------------------------------------------rJMFF010I07-         
         ------------------------------------------------------------------------------>JMFN039P03-                   
        ------------------------------------------------------------------------------>JMFN005E15-                    
         ----------------------------------------------------------------------------->JMFN008N19-                    
        ---------------->JMFN017F15-                                                                                  
         ------------------------------------------------------------------------------>JMFN044A09-                   
         ------------------------------------------------------------------------->JMFN017K22-                        
     <--------------------------------------------------------------------------------------rJMFF022P09-              
         ------------------------------------------------------------------------------>JMFN028E10-                   
        ------------------------------------------------------------------------->JMFN030A18-