clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001D02 | Sequence | 589 | 007153 (19) | ref|XP_010671859.1| | 1e-61 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] | 560 | 007153 (19) | ref|XP_010671859.1| | 8e-62 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] |
JMFF009L15 | Sequence | 589 | 007153 (19) | ref|XP_010671859.1| | 4e-62 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] | 565 | 007153 (19) | ref|XP_010671859.1| | 3e-62 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] |
JMFF014K08 | Sequence | 543 | 007153 (19) | ref|XP_010671859.1| | 9e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] | |||||
JMFF022L03 | Sequence | 521 | 007153 (19) | ref|XP_010671859.1| | 4e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] | 529 | 007153 (19) | ref|XP_010671859.1| | 4e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] |
JMFF022L15 | Sequence | 516 | 007153 (19) | ref|XP_010671859.1| | 4e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] | 561 | 007153 (19) | ref|XP_010671859.1| | 6e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] |
JMFF024L15 | Sequence | 443 | 007153 (19) | ref|XP_010671859.1| | 5e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] | 565 | 007153 (19) | ref|XP_010671859.1| | 2e-62 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] |
JMFF047A15 | Sequence | 575 | 007153 (19) | ref|XP_010671859.1| | 8e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] | 337 | 007153 (19) | |||
JMFN005N18 | Sequence | 539 | 007153 (19) | ref|XP_010671859.1| | 8e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] | |||||
JMFS048F08 | Sequence | 491 | 007153 (19) | ref|XP_010671859.1| | 5e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] | |||||
JMSF030P14 | Sequence | 597 | 007153 (19) | ref|XP_010671859.1| | 1e-62 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] | 546 | 007153 (19) | ref|XP_010671859.1| | 6e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] |
JMSF038L05 | Sequence | 590 | 007153 (19) | ref|XP_010671859.1| | 9e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] | 531 | 007153 (19) | ref|XP_010671859.1| | 4e-63 | PREDICTED: 60S ribosomal protein L36-2-like [Beta vulgaris subsp. vulgaris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007153============================================ 706 21 ------------------------------------------------------------------------------->JMFF047A15 <-----------------------------------------------rJMFF047A15 139 -------------------------------------------------------------->JMFF024L15 <-------------------------------------------------------------------------------rJMFF024L15 139 ----------------------------------------------------------------------------------->JMFF009L15 <-------------------------------------------------------------------------------rJMFF009L15 143 ------------------------------------------------------------------------>JMFF022L15 <-------------------------------------------------------------------------------rJMFF022L15 158 --------------------------------------------------------------------------------->JMFF001D02 <-----------------------------------------------------------------------------rJMFF001D02 158 ---------------------------------------------------------------------------------->JMSF030P14 <-----------------------------------------------------------------------------rJMSF030P14 174 ----------------------------------------------------------------------------------->JMSF038L05 <--------------------------------------------------------------------------rJMSF038L05 175 ------------------------------------------------------------------------->JMFF022L03 <--------------------------------------------------------------------------rJMFF022L03
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------------------->JMFN005N18- <---------------------------------------------------------------------------rJMFF014K08- --------------------------------------------------------------------->JMFS048F08-