List of clones in pair P009456.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002M08Sequence564011538 (48)gb|KJB11482.1|1e-73hypothetical protein B456_001G261400 [Gossypium raimondii]810011538 (48)ref|XP_009622894.1|412PREDICTED: formate dehydrogenase, mitochondrial [Nicotiana tomentosiformis]
JMFF006N03Sequence574011538 (48)gb|KJB11482.1|4e-99hypothetical protein B456_001G261400 [Gossypium raimondii]808011538 (48)ref|XP_009622894.1|412PREDICTED: formate dehydrogenase, mitochondrial [Nicotiana tomentosiformis]
JMFF008E23Sequence625011538 (48)gb|KJB11482.1|8e-98hypothetical protein B456_001G261400 [Gossypium raimondii]711011538 (48)ref|XP_011098484.1|364PREDICTED: formate dehydrogenase, mitochondrial [Sesamum indicum]
JMFF010N01Sequence579011538 (48)gb|EPS74213.1|2e-72formate dehydrogenase [Genlisea aurea]700011538 (48)ref|XP_011098484.1|352PREDICTED: formate dehydrogenase, mitochondrial [Sesamum indicum]
JMFF012L18Sequence507011538 (48)gb|KJB11482.1|3e-80hypothetical protein B456_001G261400 [Gossypium raimondii]697011538 (48)ref|XP_011098484.1|351PREDICTED: formate dehydrogenase, mitochondrial [Sesamum indicum]
JMFF013K05Sequence507011538 (48)gb|KJB11482.1|3e-80hypothetical protein B456_001G261400 [Gossypium raimondii]147011538 (48)ref|XP_010033276.1|7e-28PREDICTED: formate dehydrogenase, mitochondrial-like [Eucalyptus grandis] gb|KC
JMFF016B07Sequence564011538 (48)gb|KJB11482.1|8e-95hypothetical protein B456_001G261400 [Gossypium raimondii]644011538 (48)ref|XP_011098484.1|314PREDICTED: formate dehydrogenase, mitochondrial [Sesamum indicum]
JMFF020E01Sequence559011538 (48)gb|KJB11482.1|4e-94hypothetical protein B456_001G261400 [Gossypium raimondii]763011538 (48)ref|XP_011098484.1|370PREDICTED: formate dehydrogenase, mitochondrial [Sesamum indicum]
JMFF021C15Sequence548011538 (48)gb|KJB11482.1|3e-79hypothetical protein B456_001G261400 [Gossypium raimondii]646011538 (48)gb|KCW52881.1|4e-99hypothetical protein EUGRSUZ_J02207 [Eucalyptus grandis]
JMFF024K17Sequence504011538 (48)gb|KJB11482.1|1e-79hypothetical protein B456_001G261400 [Gossypium raimondii]686011538 (48)ref|XP_011098484.1|345PREDICTED: formate dehydrogenase, mitochondrial [Sesamum indicum]
JMFF026E03Sequence574011538 (48)gb|KJB11482.1|3e-101hypothetical protein B456_001G261400 [Gossypium raimondii]768011538 (48)ref|XP_011098484.1|372PREDICTED: formate dehydrogenase, mitochondrial [Sesamum indicum]
JMFF029C07Sequence428011538 (48)ref|XP_010111768.1|2e-40Formate dehydrogenase [Morus notabilis] gb|EXC31630.1| Formate dehydrogenase [Mo739011538 (48)ref|XP_011098484.1|368PREDICTED: formate dehydrogenase, mitochondrial [Sesamum indicum]
JMFF030C09Sequence509011538 (48)gb|KJB11482.1|7e-71hypothetical protein B456_001G261400 [Gossypium raimondii]698011538 (48)ref|XP_011098484.1|347PREDICTED: formate dehydrogenase, mitochondrial [Sesamum indicum]
JMFF031F02Sequence509011538 (48)gb|KJB11482.1|4e-84hypothetical protein B456_001G261400 [Gossypium raimondii]
JMFF033N20Sequence508011538 (48)gb|KJB11482.1|3e-81hypothetical protein B456_001G261400 [Gossypium raimondii]723011538 (48)ref|XP_011098484.1|360PREDICTED: formate dehydrogenase, mitochondrial [Sesamum indicum]
JMFF037D06Sequence566011538 (48)gb|KJB11482.1|8e-96hypothetical protein B456_001G261400 [Gossypium raimondii]
JMFF039J16Sequence570011538 (48)gb|KJB11482.1|6e-97hypothetical protein B456_001G261400 [Gossypium raimondii]649011538 (48)gb|KCW52881.1|6e-99hypothetical protein EUGRSUZ_J02207 [Eucalyptus grandis]
JMFF041E03Sequence646011538 (48)gb|KJB11482.1|2e-115hypothetical protein B456_001G261400 [Gossypium raimondii]574011538 (48)gb|AFK34593.1|4e-82unknown [Lotus japonicus]
JMFF044O23Sequence640011538 (48)gb|KJB11482.1|1e-80hypothetical protein B456_001G261400 [Gossypium raimondii]597011538 (48)ref|XP_009622894.1|271PREDICTED: formate dehydrogenase, mitochondrial [Nicotiana tomentosiformis]
JMFF045D08Sequence602011538 (48)gb|KJB11482.1|1e-105hypothetical protein B456_001G261400 [Gossypium raimondii]398011538 (48)ref|XP_009622894.1|194PREDICTED: formate dehydrogenase, mitochondrial [Nicotiana tomentosiformis]
JMFF045H18Sequence591011538 (48)gb|KJB11482.1|8e-74hypothetical protein B456_001G261400 [Gossypium raimondii]511011538 (48)ref|XP_009622894.1|220PREDICTED: formate dehydrogenase, mitochondrial [Nicotiana tomentosiformis]
JMFF045M14Sequence655011538 (48)gb|KCW52879.1|5e-144hypothetical protein EUGRSUZ_J02207 [Eucalyptus grandis]616011538 (48)ref|XP_009622894.1|286PREDICTED: formate dehydrogenase, mitochondrial [Nicotiana tomentosiformis]
JMFN014A01Sequence627011538 (48)gb|KJB11482.1|1e-116hypothetical protein B456_001G261400 [Gossypium raimondii]
JMFN018K09Sequence533011538 (48)ref|XP_009622894.1|244PREDICTED: formate dehydrogenase, mitochondrial [Nicotiana tomentosiformis]
JMSF016O10Sequence332011538 (48)gb|KJB11482.1|1e-43hypothetical protein B456_001G261400 [Gossypium raimondii]736011538 (48)ref|XP_009622894.1|388PREDICTED: formate dehydrogenase, mitochondrial [Nicotiana tomentosiformis]

Contig 11538 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig011538============================================1450         
  47 ------------------------------------->JMFF021C15                                                                 
                                                           <------------------------------------------rJMFF021C15  
  53     -------------------------------------->JMFF020E01                                                            
                                                    <----------------------------------------------------rJMFF020E01  
  53     --------------------------------------->JMFF026E03                                                           
                                                    <----------------------------------------------------rJMFF026E03  
  62     -------------------------------------->JMFF045H18                                                            
                                                                     <----------------------------------rJMFF045H18  
  62     ------------------------------------------>JMFF044O23                                                        
                                                               <----------------------------------------rJMFF044O23  
  62     -------------------------------------------->JMFF041E03                                                      
                                                                 <---------------------------------------rJMFF041E03  
  75     -------------------------------------->JMFF002M08                                                            
                                                <-------------------------------------------------------rJMFF002M08  
  76     ----------------------------->JMFF029C07                                                                     
                                                    <--------------------------------------------------rJMFF029C07  
  76     -------------------------------------->JMFF039J16                                                            
                                                           <--------------------------------------------rJMFF039J16  
  82     --------------------------------------->JMFF006N03                                                           
                                                <-------------------------------------------------------rJMFF006N03  
  87     ---------------------------------->JMFF033N20                                                                
                                                     <------------------------------------------------rJMFF033N20  
  94     ---------------------------------->JMFF012L18                                                                
                                                      <-----------------------------------------------rJMFF012L18  
  94     ---------------------------------->JMFF024K17                                                                
                                                       <----------------------------------------------rJMFF024K17  
  94     -------------------------------------->JMFF016B07                                                            
                                                          <-------------------------------------------rJMFF016B07  
  94     --------------------------------------->JMFF010N01                                                           
                                                      <-----------------------------------------------rJMFF010N01  
 107     ---------------------->JMSF016O10                                                                            
                                                  <--------------------------------------------------rJMSF016O10  
 111     ------------------------------------------>JMFF008E23                                                        
                                                     <------------------------------------------------rJMFF008E23  
 113     ---------------------------------->JMFF030C09                                                                
                                                     <-----------------------------------------------rJMFF030C09  
 144     ----------------------------------------->JMFF045D08                                                         
                                                                        <--------------------------rJMFF045D08  
 305     ---------------------------------->JMFF013K05                                                                
                                                                             <---------rJMFF013K05  
 529                                     -------------------------------------------->JMFF045M14                      
                                                              <-----------------------------------------rJMFF045M14

The following clones don't have the opposite end in this pair.

         -------------------------------------->JMFF037D06-                                                           
         ---------------------------------->JMFF031F02-                                                               
         ---------------------------------->JMFF036O10*                                                               
                                                                  ------------------------------------>JMFN018K09-    
          ------------------------------------------>JMFN014A01-                                                      
         -------------------------------------->JMFF051D20*