clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF024A12 | Sequence | 486 | 009387 (10) | ref|XP_009587195.1| | 3e-60 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana t | 791 | 009387 (10) | emb|CDP00375.1| | 3e-149 | unnamed protein product [Coffea canephora] |
JMFN015H12 | Sequence | 546 | 009387 (10) | ref|XP_009587195.1| | 3e-83 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana t | |||||
JMFS166E06 | Sequence | 630 | 009387 (10) | ref|XP_009587195.1| | 2e-94 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana t | |||||
JMSF017L06 | Sequence | 530 | 009387 (10) | ref|XP_009779951.1| | 1e-53 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana s | 786 | 009387 (10) | emb|CDP00375.1| | 3e-141 | unnamed protein product [Coffea canephora] |
JMSF028J06 | Sequence | 643 | 009387 (10) | ref|XP_009587195.1| | 7e-87 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana t | 727 | 009387 (10) | emb|CDP00375.1| | 5e-141 | unnamed protein product [Coffea canephora] |
JMSF041H23 | Sequence | 712 | 009387 (10) | ref|XP_009587195.1| | 5e-113 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Nicotiana t | 674 | 009387 (10) | emb|CDP00375.1| | 3e-126 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009387============================================1608 73 --------------------------------------->JMSF028J06 <--------------------------------------------rJMSF028J06 225 ------------------->JMSF017L06 <-------------------------------------------------rJMSF017L06 248 ------------------------------------------->JMSF041H23 <------------------------------------rJMSF041H23 281 ------------------>JMFF024A12 <------------------------------------------------rJMFF024A12
The following clones don't have the opposite end in this pair.
--------------------------->JMFS166E06- --------------------------------->JMFN015H12-