List of clones in pair P009201.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035K19Sequence553003162 (62)ref|XP_009613269.1|3e-57PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic [Nicotiana t637024377gb|AAD27882.2|AF139470_12e-72chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]

Contig 3162 BLAST Hits against nr-aa DB Show

Contig 24377 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

Contig24377 is a singlet.
SCORE============================================Contig003162============================================ 991         ============================================Contig024377============================================

          ------------------------------------------------------------>JMFN008C18-                                    
          --------------------------------------------------------->JMFN025I23-                                       
                                                            <------------------------------------------JMFN030A22-    
                                                 <------------------------------------------------------JMFN012E10-   
                                                            <-----------------------------------------rJMFF014E03-    
          ------------------------------------------------------------>JMFN033C19-                                    
         ------------------------------------------------------>JMFF049O07#                                           
                     ---------------------------------------------->JMFN009B16-                                       
           ----------------------------------------------------->JMFN015L16-                                          
             ------------------------------------------------------------->JMFN010F05-                                
                                                --------------------------------------------------->JMFN031J19-       
                                          ---------------------->JMFN037H02-                                          
          ------------------------------------------------------------>JMFN015N24-                                    
              ---------------------------------------------------->JMFN035I15-                                        
           ---------------------------------------------------------------->JMFN019I22-                               
                                     --------------------------------------------------------------->JMFN010O09-      
          ------------------------------------------------------------>JMFN010P24-                                    
                                                     <----------------------------------------------rJMSF007D12-      
         ------------------------------------------------------->JMFF035K19#                                          
                                                       ------------------------------------------------->JMFN028E15-  
        -------------------------------------------------------->JMFN029I19-                                          
          ------------------------------------------------------------->JMFN003C23-                                   

      --------------------------------------------------------------->JMSF035C15**
                                                                     <-----------------------------rJMFF048B22**
        ---------------------------------------------------------->JMFF043C15**
        ------------------------------------------------------------>JMFF049C18**
                              <---------------------------------------------------------------------rJMSF003P07**
         -------------------------------------------------------->JMFF019E24**
                                                            <-----------------------------------------rJMFF010F07**
        --------------------------------------------------------------------->JMSF036K24**
                                                             <-----------------------------------------rJMFF029F18**
                                            <-----------------------------------------------------------rJMFF049C18**
                                                             <-----------------------------------------rJMFF002D18**
        ------------------------------------------------------->JMFF010F07**
         --------------------------------------->JMFF048B22**
        -------------------------------------------------------->JMFF031J04**
        ------------------------------------------------------------------>JMSF052C12**
                                                            <-----------------------------------------rJMFF037E12**
        -------------------------------------------------------->JMFF029F18**
                                                            <-----------------------------------------rJMFF029C18**
                                <-------------------------------------------------------------------rJMSF035C15**
                              <----------------------------------------------------------------------rJMSF036K24**
        ------------------------------------------------------->JMFF010N16**
                                                            <-----------------------------------------rJMFF019E24**
     ------------------------------------------>JMFF022A08**
                                                            <-----------------------------------------rJMFF031J04**
         -------------------------------------------------------------------------->JMSF043H15**
        -------------------------------------------------------->JMFF029C18**
                                                            <-----------------------------------------rJMFF010N16**
                                                            <-----------------------------------------rJMFF025G03**
      ---------------------->JMSF003P07**
        ------------------------------>JMFF033D01**
                                                             <-----------------------------------------rJMFF034E23**
        --------------------------------------------->JMFF034E23**
                                                            <-----------------------------------------rJMFF033D01**
                                                             <-----------------------------------------rJMFF022A08**
        -------------------------------------------------------->JMFF037E12**
                       <----------------------------------------------------------------------------rJMSF043H15**
        --------------------------------------------------------->JMFF025G03**
                                            <-----------------------------------------------------------rJMFF043C15**
               <------------------------------------------------------------------------------------rJMSF052C12**
        ------------------>JMFF002D18**