clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF007K04 | Sequence | 551 | 002716 (9) | ref|XP_009788106.1| | 3e-33 | PREDICTED: tobamovirus multiplication protein 2A [Nicotiana sylvestris] ref|XP_0 | 710 | 002716 (9) | ref|XP_009590611.1| | 4e-88 | PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref |
JMFF020H21 | Sequence | 367 | 002716 (9) | ref|XP_011028243.1| | 1e-15 | PREDICTED: tobamovirus multiplication protein 2A-like [Populus euphratica] | |||||
JMFF048E23 | Sequence | 568 | 002716 (9) | ref|XP_009590611.1| | 4e-37 | PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref | 477 | 002716 (9) | ref|XP_011028243.1| | 5e-31 | PREDICTED: tobamovirus multiplication protein 2A-like [Populus euphratica] |
JMFF051A23 | Sequence | 623 | 002716 (9) | ref|XP_009788106.1| | 4e-39 | PREDICTED: tobamovirus multiplication protein 2A [Nicotiana sylvestris] ref|XP_0 | 410 | 002716 (9) | gb|KJB25374.1| | 3e-19 | hypothetical protein B456_004G188200 [Gossypium raimondii] |
JMFN004J09 | Sequence | 641 | 002716 (9) | ref|XP_009590611.1| | 7e-60 | PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref | |||||
JMSF047O13 | Sequence | 653 | 023285 | ref|XP_004245703.1| | 2e-31 | PREDICTED: deoxyribodipyrimidine photo-lyase isoform X2 [Solanum lycopersicum] | 582 | 002716 (9) | ref|XP_009590611.1| | 5e-81 | PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
Contig23285 is a singlet.SCORE============================================Contig023285============================================ ============================================Contig002716============================================1351 <------------------------------------------rJMSF047O13# ---------------------------------------->JMFN004J09- <--------------------------rJMFF020H21- <------------------------------rJMFF051A23** <-----------------------------------rJMFF048E23** ------------------------->JMFF048E23** ---------------------------------------->JMFF007K04** ----------------------------------->JMFF051A23** <----------------------------------------------------rJMFF007K04**