List of clones in pair P008660.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006A03Sequence578004908 (27)ref|XP_009593933.1|5e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]733016921ref|XP_009593933.1|2e-86PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMFF032F04Sequence573004908 (27)ref|XP_009593933.1|4e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]646004908 (27)ref|XP_009593933.1|1e-86PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMFN005F02Sequence580004908 (27)ref|XP_009795585.1|3e-74PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana sylvestris]
JMFN005P20Sequence627004908 (27)ref|XP_009593933.1|6e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMFN012H12Sequence618004908 (27)ref|XP_009593933.1|6e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMFN013A11Sequence610004908 (27)ref|XP_009795585.1|3e-72PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana sylvestris]
JMFN014N06Sequence623004908 (27)ref|XP_009593933.1|7e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMFN015L15Sequence620004908 (27)ref|XP_009593933.1|6e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMFN025J11Sequence607004908 (27)ref|XP_009593933.1|5e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMFN028G16Sequence480004908 (27)emb|CDO97944.1|1e-51unnamed protein product [Coffea canephora]
JMFN035F19Sequence543004908 (27)ref|XP_009593933.1|2e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMFN037L11Sequence565004908 (27)ref|XP_009593933.1|3e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMSF001J14Sequence438004908 (27)ref|XP_009593933.1|1e-74PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]726004908 (27)ref|XP_009593933.1|3e-86PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMSF017L23Sequence336004908 (27)ref|XP_009593933.1|8e-49PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]621004908 (27)ref|XP_009593933.1|8e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMSF031M09Sequence662004908 (27)ref|XP_009593933.1|1e-86PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]624004908 (27)ref|XP_009593933.1|7e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMSF033D17Sequence691004908 (27)ref|XP_009593933.1|1e-86PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]638004908 (27)ref|XP_009593933.1|7e-87PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMSF033D18Sequence683004908 (27)ref|XP_009593933.1|2e-81PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]628004908 (27)ref|XP_009593933.1|7e-76PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMSF039G17Sequence669004908 (27)ref|XP_009593933.1|2e-86PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]723004908 (27)ref|XP_009593933.1|3e-86PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]
JMSF050H02Sequence633004908 (27)ref|XP_009593933.1|1e-86PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]723004908 (27)ref|XP_009593933.1|3e-86PREDICTED: 60S ribosomal protein L28-1-like [Nicotiana tomentosiformis]

Contig 4908 BLAST Hits against nr-aa DB Show

Contig 16921 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

Contig16921 is a singlet.
SCORE============================================Contig004908============================================ 726         ============================================Contig016921============================================

                     ------------------------------------------------------------------------------->JMFN005F02-      
       ----------------------------------------------------------------------------->JMFN037L11-                      
       ---------------------------------------------------------------------------------->JMFN025J11-                 
     ------------------------------------------------------------------------------->JMFF006A03#                      
       ------------------------------------------------------------------------------------>JMFN015L15-               
       ------------------------------------------------------------------------------------->JMFN005P20-              
           -------------------------------------------------------------------------->JMFN035F19-                     
                                 --------------------------------------------------------------->JMFN028G16-          
        ------------------------------------------------------------------------------------->JMFN014N06-             
       ------------------------------------------------------------------------------------>JMFN012H12-               
                      <------------------------------------------------------------------------------JMFN013A11-      

       <---------------------------------------------------------------------------------rJMSF031M09**
       <--------------------------------------------------------------------------------------rJMSF033D18**
     --------------------------------------------->JMSF017L23**
       --------------------------------------------------------------------------------------------->JMSF033D18**
      ------------------------------------------------------------------------------>JMFF032F04**
       --------------------------------------------------------------------------------------------->JMSF033D17**
     ------------------------------------------------------------------------------------------->JMSF039G17**
     <---------------------------------------------------------------------------------------------------rJMSF001J14**
       <---------------------------------------------------------------------------------------rJMSF033D17**
     <---------------------------------------------------------------------------------------------------rJMSF039G17**
     <---------------------------------------------------------------------------------------------------rJMSF050H02**
              <----------------------------------------------------------------------------------------rJMFF032F04**
     -------------------------------------------------------------------------------------->JMSF050H02**
       ------------------------------------------------------------------------------------------>JMSF031M09**
     ----------------------------------------------------------->JMSF001J14**
     <-----------------------------------------------------------------------------------rJMSF017L23**