| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMSF028D05 | Sequence | 634 | 000185 (18) | ref|XP_010090123.1| | 9e-125 | 40S ribosomal protein S3-3 [Morus notabilis] gb|EXB38920.1| 40S ribosomal protei | 667 | 004835 (186) | sp|P04715.1|RBS2_PETHY | 1e-89 | RecName: Full=Ribulose bisphosphate carboxylase small chain SSU11A, chloroplast |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig000185============================================1066 ============================================Contig004835============================================ 997 149 ---------------------------------------------------------->JMSF028D05 <-------------------------------------------------------------------rJMSF028D05 ---------------------------------------------------------------->JMSF035E24- --------------------------------------------------------->JMFN029G10- ----------------------------------------------------------->JMFN019B15- --------------------------------------------------->JMFN046B06- -------------------------------------------------------->JMFN038J17- -------------------------------------------------------------->JMFN004D18- -------------------------------------------------------------->JMFN039H16- --------------------------------------------------->JMFN002G11- ----------------------------------------------------------->JMFN003I19- <-----------------------------------------------------------JMFN035M13- ------------------------------------------------------------->JMFN016A16- --------------------------------------------------------------->JMFN032G08- ---------------------------------------------------->JMFN001D01- ----------------------------->JMSF005C17- -------------------------------------------------------------->JMFN004P04- --------------------------------------------------------------->JMFN039L12- ------------------------------------------------------------>JMFN029L04- --------------------------------------------------------------->JMFN016G01- -------------------------------------------------------------->JMFN005B03- -------------------------------------------------------------->JMFN025I18- -------------------------------------------------->JMFS050F10- ------------------------------------------------------------->JMFN039E16- ---------------------------------------------------------------->JMFN019O10- ------------------------------------------------------------->JMFN038P11- ------------------------------------------------------------->JMFN011D02- ---------------------------------------------------------------->JMFN008B24- <----------------------------------------------------------------------rJMSF044G04# -------------------------------------------------------------->JMFN015N23- --------------------------------------------------------------->JMFF016K14- ----------------------------------------------------------->JMFN020M01- <----------------rJMFF020O01- --------------------------------------------------------------->JMFN008P04- ----------------------------------------------------------------->JMFN025H08- ---------------------------------------------------------------->JMFN033H22- <------------------------------------------rJMSF005C19- ----------------------------------------------------------->JMFS097A04- ------------------------------------------------------------->JMFN016F09- <---------------------------------------------------------JMFN042M08- <---------------------------------------------------------------------rJMSF037F13* -------------------------------------------------------->JMFN008G07- -------------------------------------------------------------->JMFN030E16- --------------------------------------------------------------->JMFN003P17- -------------------------------------------------------------->JMFN019E13- --------------------------------------------------------------->JMFN040E09- --------------------------------------------------------------->JMFN038A18- ---------------------------------------------->JMFN035C01- ----------------------------------------------------------------->JMFN025K18- ---------------------------------------------------------------->JMFN007G17- <---------------------------------------------------------rJMSF006H12# --------------------------------------------------------------->JMFN041J04- ------------------------------------------------------------->JMFN040F16- ---------------------------------------------------------------->JMFN020F09- --------------------------------------------------------------->JMFN014P18- ------------------------------------------------------------->JMFN011E08- -------------------------------------------->JMFN042J10- -------------------------------------------------------------->JMFN025D20- ----------------------------------------------------------------->JMFN033N15- -------------------------------------------->JMFN009E07- -------------------------------------------------------------->JMFN003L11- -------------------------------------------------------------->JMFN038O04- <---------------------------------------------------------------------rJMSF031E10* ------------------------------------------------------------->JMFN029L20- ---------------------------------------------------------------->JMFN003L19- ------------------------------------------------------------->JMFN011O10- ----------------------------------------------------------->JMFN039D12- -------------------------------------------------------->JMFS036B10- -------------------------------------------------------------->JMFN034F06- ---------------------------------------------------------------->JMFN006I12- ------------------------------------------------->JMFN005F15- ----------------------------------->JMFN028H10- ---------------------------------------------------------------->JMFN011E22- ---------------------------------------------------------------->JMFN031C21- --------------------------------------------------------------->JMFN008O03- --------------------------------------------------->JMFN025K16- <------------------------------------------------------------------rJMFF023C22- -------------------------------------------------------------->JMFN015J13- -------------------------------------------------------------->JMFS100G06- <------------------------------------------------------------JMSF039O13* --------------------------------------------------------------->JMFN042J11- ------------------------->JMFN004M08- --------------------------------------------------------------->JMFN018C05- ------------------------------------------------------------->JMFN019D08- ------------------------------------------------------------->JMFN018B02- ----------------------------->JMFN028J06- ------------------------------------------------------------>JMFN009I01- ------------------------------------------------------------->JMFN038C17- ---------------------------------------------------------->JMFN036P01- ---------------------------------------------------------------->JMFN028P07- ---------------------------------------------------------------->JMFN014J22- --------------------------------------------------------------->JMFN015N15- --------------------------------------------------->JMFN046J18- ------------------------------------------------------->JMFN004G04- ------------------------------------------------------------->JMFN004I21- -------------------------------------------------------------->JMFN009K18- -------------------------------------------------------------->JMFN046A08- --------------------------------------------------->JMFN016L16- ----------------------------------------------------->JMFN004N06- --------------------------------------------------------------->JMFN004O16- ------------------------------------------------------------->JMFN038H15- ---------------------------------------------------------------->JMFN033N11- <------------------------------------------------------------JMFN034H06- ------------------------------------------------------------->JMFN016M10- -------------------------------------------------------------->JMFN015K19- --------------------------------------------------------->JMFN011H13- --------------------------------------------------->JMFN004E21- -------------------------------------------------------------->JMFN043G17- ------------------------------------------------------------->JMFN037P21- ---------------------------------------------------------------->JMFN035O07- --------------------------------------------------->JMFN033G13- -------------------------------------------------------------->JMFN025C24- --------------------------------------------------------------->JMFN009G13- ------------------------------------------------------------->JMFN015B04- --------------------------------------------->JMSF006H10- -------------------------------------------------------------->JMFN007B02- -------------------------------------------------------------->JMFN015F07- --------------------------------------------------------------->JMFN016P02- <------------------------------------------------------------rJMFF023P10- -------------------------------------------------------------->JMFN008J16- ----------------------------------------------------->JMFS160H07- -------------------------------------------------------------->JMFN040H12- --------------------------------------------------------------->JMFN025E19- ------------------------------------------------>JMFN028M12- ---------------------------------------------------------------->JMFN031H21- --------------->JMFN030D12- --------------------------------------------------->JMFF032M16** <--------------------------------------------------------------------------rJMFF017H06** ------------------------------------------>JMFF012E19** <-------------------------------------------------------------------rJMSF034A09** <--------------------------------------------------------------------------rJMFF032M16** ------------------------------------------------->JMFF019N18** <--------------------------------------------------------------------rJMFF019N18** ------------------------------------------------------------->JMSF025I14** <----------------------------------------------------------------------rJMFF012E19** ------------------------------------------------->JMFF017H06** ------------------------------------------------------------>JMSF034A09** <----------------------------------------------------------rJMSF025I14** <-------------------------------------------------------------------rJMSF049G13** <-------------------------------------------------------------------rJMSF022L22** <-----------------------------------------------------------------------rJMSF016J17** <------------------------------------------------------------------------rJMSF040L23** ------------------------------------------------------------->JMSF031M19** <-------------------------------------------------------------rJMSF029D04** <----------------------------------------------------------------rJMSF013I05** <---------------------------------------------------------------------rJMSF016C06** ----------------------------------------------->JMSF016J17** --------------------------------------------------------->JMFF028L01** -------------------------------------------------------->JMSF013I05** <-------------------------------------------------------------------rJMSF016H24** <---------------------------------------------------------rJMFF043G15** ---------------------->JMFF032I12** <----------------------------------------------------------------rJMFF028L01** <-----------------------------------------------------------------rJMSF042N10** -------------------------------------------------------------------------->JMSF042N10** -------------------------------------------->JMSF006L10** -------------------------------------------------------------------->JMSF029D04** ---------------------------------------->JMSF016C06** <-----------------------------------------------------------------rJMSF010G13** <---------rJMFF008D15** <--------------------rJMFF032I12** ----------------------------------------->JMSF013P01** ------------------------>JMSF016D23** <------------------------------------------------------------------rJMSF013P01** ------------------------------------------------------------------->JMSF051P07** --------------------------------------------------------------------->JMSF046O15** <-----------------------------------------------------------------rJMSF016N22** <------------------------------------------------------------rJMFF022K10** <-----------------------------------------------------------------------rJMSF039L23** <-----------------------------------------------------------------rJMSF011P07** ---------------------------------------------------------------->JMFF043G15** ----------------------------------------------->JMSF016N22** ----------------------------------------------------------------->JMSF022L22** ----------------------------------------------------------------------->JMSF039L23** <-----------------------------------------------------------------------rJMSF051L03** ------------------------------------------------->JMFF022K10** ---------------------------------------------------------------->JMFF043O24** --------------------------------------------------------------------->JMSF028A12** --------------------------------------------->JMSF010G13** <---------------------------------------------------------rJMFF043O24** -------------------------------->JMSF003N03** <--------------------------------------------------------------rJMSF046O15** ------------------------------------------------>JMSF016M12** ---------------------------------------------------------->JMSF029H18** <---------------------------------------------------rJMSF006L10** <----------------------------------------------------------------------rJMFF022M24** <-----------------------------------------------------------------------rJMSF016M12** ---------------------->JMSF011P07** ------------------------------------------------------------->JMFF008D15** <-----------------------------------------------------------------------rJMSF051P07** <-------------------------------------------------------------------rJMSF028A12** ----------------------------------------------------------------------->JMSF049G13** ------------------------------------------------------------->JMSF051L03** ---------------------------------------------------->JMFF002H16** <-------------------------------------------------------------rJMSF031M19** <-----------------------------------------------------------------rJMSF003N03** ---------------------------------------------------->JMFF027F21** <-----------------------------------------------------------------rJMFF027F21** -------------------------------------------------------------------->JMSF040L23** ------------------------>JMSF016H24** <------------------------------------------------------------------rJMFF002H16** <---------------------------------------------------------------------rJMSF029H18** ---------------------------------------------->JMFF022M24** <-------------------------------------------------------------------rJMSF016D23**