List of clones in pair P008044.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049O07Sequence546003162 (62)ref|XP_009613269.1|4e-77PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic [Nicotiana t468014927gb|KGN65078.1|7e-30hypothetical protein Csa_1G195220 [Cucumis sativus]

Contig 3162 BLAST Hits against nr-aa DB Show

Contig 14927 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

Contig14927 is a singlet.
SCORE============================================Contig003162============================================ 991         ============================================Contig014927============================================

          ------------------------------------------------------------>JMFN033C19-                                    
          ------------------------------------------------------------>JMFN010P24-                                    
                                                       ------------------------------------------------->JMFN028E15-  
                                          ---------------------->JMFN037H02-                                          
          ------------------------------------------------------------>JMFN015N24-                                    
           ---------------------------------------------------------------->JMFN019I22-                               
                                                 <------------------------------------------------------JMFN012E10-   
                                                            <-----------------------------------------rJMFF014E03-    
         ------------------------------------------------------>JMFF049O07#                                           
         ------------------------------------------------------->JMFF035K19#                                          
          ------------------------------------------------------------->JMFN003C23-                                   
          --------------------------------------------------------->JMFN025I23-                                       
           ----------------------------------------------------->JMFN015L16-                                          
                                                            <------------------------------------------JMFN030A22-    
              ---------------------------------------------------->JMFN035I15-                                        
          ------------------------------------------------------------>JMFN008C18-                                    
                                                --------------------------------------------------->JMFN031J19-       
             ------------------------------------------------------------->JMFN010F05-                                
        -------------------------------------------------------->JMFN029I19-                                          
                                     --------------------------------------------------------------->JMFN010O09-      
                     ---------------------------------------------->JMFN009B16-                                       
                                                     <----------------------------------------------rJMSF007D12-      

        -------------------------------------------------------->JMFF029C18**
                                                            <-----------------------------------------rJMFF033D01**
        ---------------------------------------------------------->JMFF043C15**
                       <----------------------------------------------------------------------------rJMSF043H15**
         -------------------------------------------------------->JMFF019E24**
      --------------------------------------------------------------->JMSF035C15**
                                                             <-----------------------------------------rJMFF034E23**
      ---------------------->JMSF003P07**
                                                            <-----------------------------------------rJMFF029C18**
                                                            <-----------------------------------------rJMFF037E12**
                                                            <-----------------------------------------rJMFF010F07**
                                                             <-----------------------------------------rJMFF002D18**
                                                                     <-----------------------------rJMFF048B22**
                                                             <-----------------------------------------rJMFF022A08**
        ------------------------------>JMFF033D01**
        ------------------------------------------------------->JMFF010F07**
        --------------------------------------------->JMFF034E23**
        --------------------------------------------------------------------->JMSF036K24**
        -------------------------------------------------------->JMFF029F18**
                                                            <-----------------------------------------rJMFF025G03**
                                                             <-----------------------------------------rJMFF029F18**
        -------------------------------------------------------->JMFF037E12**
               <------------------------------------------------------------------------------------rJMSF052C12**
                                                            <-----------------------------------------rJMFF031J04**
     ------------------------------------------>JMFF022A08**
        ------------------>JMFF002D18**
         -------------------------------------------------------------------------->JMSF043H15**
                                                            <-----------------------------------------rJMFF010N16**
                                <-------------------------------------------------------------------rJMSF035C15**
                                            <-----------------------------------------------------------rJMFF043C15**
        --------------------------------------------------------->JMFF025G03**
                                                            <-----------------------------------------rJMFF019E24**
        -------------------------------------------------------->JMFF031J04**
                                            <-----------------------------------------------------------rJMFF049C18**
         --------------------------------------->JMFF048B22**
        ------------------------------------------------------->JMFF010N16**
                              <----------------------------------------------------------------------rJMSF036K24**
        ------------------------------------------------------------------>JMSF052C12**
                              <---------------------------------------------------------------------rJMSF003P07**
        ------------------------------------------------------------>JMFF049C18**