clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMCP016G01 | Sequence | 609 | 009431 (14) | ref|XP_009781572.1| | 5e-75 | PREDICTED: protein trichome birefringence-like 37 [Nicotiana sylvestris] ref|XP | |||||
JMFF008I11 | Sequence | 611 | 009431 (14) | ref|XP_009790075.1| | 2e-71 | PREDICTED: protein trichome birefringence-like 38 [Nicotiana sylvestris] ref|XP | 785 | 009431 (14) | ref|XP_009781572.1| | 6e-108 | PREDICTED: protein trichome birefringence-like 37 [Nicotiana sylvestris] ref|XP |
JMFF016A01 | Sequence | 588 | 009431 (14) | ref|XP_009790075.1| | 6e-67 | PREDICTED: protein trichome birefringence-like 38 [Nicotiana sylvestris] ref|XP | 742 | 014827 | ref|XP_009781572.1| | 7e-88 | PREDICTED: protein trichome birefringence-like 37 [Nicotiana sylvestris] ref|XP |
JMFF023A09 | Sequence | 491 | 009431 (14) | ref|XP_008371453.1| | 2e-54 | PREDICTED: protein trichome birefringence-like 38 [Malus domestica] | 762 | 009431 (14) | ref|XP_009781572.1| | 5e-116 | PREDICTED: protein trichome birefringence-like 37 [Nicotiana sylvestris] ref|XP |
JMSF010D14 | Sequence | 335 | 009431 (14) | ref|XP_011096427.1| | 3e-18 | PREDICTED: protein trichome birefringence-like 38 [Sesamum indicum] | 801 | 009431 (14) | ref|XP_009781572.1| | 2e-117 | PREDICTED: protein trichome birefringence-like 37 [Nicotiana sylvestris] ref|XP |
JMSF020O11 | Sequence | 698 | 009431 (14) | ref|XP_009790075.1| | 3e-70 | PREDICTED: protein trichome birefringence-like 38 [Nicotiana sylvestris] ref|XP | 757 | 009431 (14) | ref|XP_009781572.1| | 2e-102 | PREDICTED: protein trichome birefringence-like 37 [Nicotiana sylvestris] ref|XP |
JMSF032L10 | Sequence | 661 | 009431 (14) | ref|XP_009599976.1| | 2e-55 | PREDICTED: protein trichome birefringence-like 37 [Nicotiana tomentosiformis] | 737 | 009431 (14) | ref|XP_009781572.1| | 3e-101 | PREDICTED: protein trichome birefringence-like 37 [Nicotiana sylvestris] ref|XP |
JMSF034D08 | Sequence | 641 | 009431 (14) | ref|XP_009790075.1| | 1e-54 | PREDICTED: protein trichome birefringence-like 38 [Nicotiana sylvestris] ref|XP | 665 | 009431 (14) | ref|XP_009781572.1| | 1e-91 | PREDICTED: protein trichome birefringence-like 37 [Nicotiana sylvestris] ref|XP |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
Contig14827 is a singlet.SCORE============================================Contig009431============================================1379 ============================================Contig014827============================================ ------------------------------------------->rJMCP016G01- ------------------------------------------>JMFF016A01# ------------------------------------------->JMFF008I11** <------------------------------------------------------rJMFF023A09** ---------------------------------------------->JMSF034D08** <--------------------------------------------------------rJMFF008I11** -------------------------------------------------->JMSF020O11** <---------------------------------------------------------rJMSF010D14** <------------------------------------------------------rJMSF020O11** <----------------------------------------------------rJMSF032L10** ----------------------------------------------->JMSF032L10** ----------------------------------->JMFF023A09** <-----------------------------------------------rJMSF034D08** ----------------------->JMSF010D14**