List of clones in pair P006312.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009G16Sequence400007770 (81)gb|AFU50381.1|2e-61chloroplast ribulose bisphosphate carboxylase/oxygenase activase small isoform 764002660 (2)ref|XP_009590721.1|5e-70PREDICTED: protein kinase 2B, chloroplastic-like [Nicotiana tomentosiformis]

Contig 7770 BLAST Hits against nr-aa DB Show

Contig 2660 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig007770============================================1691         ============================================Contig002660============================================ 806
  87    ----------------------->JMSF009G16                                                                            <----------------------------------------------------------------------------------------------rJMSF009G16  
        --------------------------------------->JMSF050O04*                                                           
                                                               <-----------------------------rJMSF047J23-             
                                                      <--------------------------rJMSF044F12#                         
         ------------------------------------>JMFN032L19-                                                             
                                                                <----------------------------rJMSF043H17-             
         --------------------------------->JMFN016H10-                                                                
                                                                                                                                               <--------------------------------------------------------------------------rJMFF041F18* 
        ----------------------------------->JMFF009J24**
        --------------------------------->JMFF019G05**
        ------------------->JMSF004G22**
       -------------------------------------->JMSF028D06**
                                                       <------------------------------------------rJMFF027B21**
                                                      <--------------------------------------------rJMSF045J23**
                                                     <---------------------------------------------rJMFF006G03**
        --------------------------------->JMFF007E22**
                                                 <----------------------------------------------rJMSF045E20**
        --------------------------------------->JMSF045N02**
                                                                                 <------------rJMSF004G22**
                                                     <-------------------------------------------rJMSF024I15**
                                                    <--------------------------------------------rJMSF028D06**
        --------------------------------------------->JMSF042H17**
               ------------------------------------->JMSF045J23**
                                                      <---------------------------------------------rJMSF012E03**
        --------------------------------->JMFF027M24**
                                               ------------>JMSF015D24**
        ---------------------------->JMFF040F06**
        ----------------------------->JMFF046B02**
        --------------------------------------->JMSF041C15**
                                                           <------------------------------------------rJMFF007P06**
                                                                                    <------------rJMSF046N10**
        ---------------------------->JMFF029F19**
                                            <----------------------------------------------------rJMSF052G23**
                                                  <----------------------------------------------rJMSF014M21**
                                                           <-------------------------------------rJMSF041C15**
                                                            <----------------------------------------rJMFF027M24**
        -------------------------------------->JMSF050C24**
                                                                     <-----------------------------------rJMFF051O04**
        ------------------->JMSF002I05**
        ------------->JMSF004B07**
        -------------------------------->JMFF027B21**
        ------------------------------>JMFF046N17**
                                                      <-----------------------------------------rJMSF045N02**
                                                     <--------------------------------------------rJMFF040F06**
                                                       <--------------------------------------------rJMSF020K08**
        ------------->JMSF012E03**
        -------------------------------------->JMSF030P15**
                                                  <----------------------------------------------rJMSF023P10**
        ------------->JMSF009B12**
                                                  <----------------------------------------------rJMSF030P15**
        ------------------------------>JMFF038H09**
                                                    <--------------------------------------------rJMSF007N23**
                                                      <------------------------------------------rJMSF037L10**
     ------------------>JMSF007N23**
                                                       <--------------------------------------------rJMSF015D24**
                                                     <-------------------------------------------rJMSF002I05**
         ------------------->JMSF018D04**
                                                       <--------------------------------------------rJMSF042H17**
      ---------------------------------->JMSF023P10**
                                                                           <-----------------------------rJMFF046B02**
        ------------------------------------->JMSF020K08**
        -------------------------------------->JMFF041N09**
                                                        <--------------------------------------------rJMSF018D04**
        --------------------------------->JMFF007P06**
       ---------------------------->JMSF014M21**
                                                                                    --------------->JMSF046N10**
                                                          <----------------------------------------rJMFF009J24**
                                                               <-----------------------------------rJMFF041N09**
                                                          <------------------------------------------rJMFF007E22**
        ------------------------------------>JMFF051O04**
       --------------------------------------->JMSF045E20**
                                                                       <---------------------------rJMFF046N17**
                                                           <------------------------------------------rJMFF019G05**
                                                                      <-------------------------------rJMFF029F19**
                                                       <------------------------------------------rJMSF050C24**
                                                                                <------------------rJMSF004B07**
        --------------------------------->JMFF006G03**
        ----------------------------------->JMSF052G23**
                                                           <---------------------------------------rJMFF038H09**
                                                     <----------------------------------------------rJMSF009B12**
       -------------------------------------->JMSF024I15**
       -------------------------------------->JMSF037L10**