clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF015G17 | Sequence | 158 | 004064 (22) | ref|XP_008805646.1| | 7e-08 | PREDICTED: reticulon-like protein B3 [Phoenix dactylifera] | |||||
JMFF025K17 | Sequence | 560 | 004064 (22) | gb|KJB24635.1| | 2e-54 | hypothetical protein B456_004G154600 [Gossypium raimondii] | 597 | 004064 (22) | ref|XP_009766982.1| | 5e-77 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] |
JMFF026K22 | Sequence | 549 | 004064 (22) | gb|KJB24635.1| | 4e-53 | hypothetical protein B456_004G154600 [Gossypium raimondii] | 726 | 004064 (22) | ref|XP_009766982.1| | 6e-95 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] |
JMFF030L03 | Sequence | 520 | 004064 (22) | gb|KJB24635.1| | 4e-47 | hypothetical protein B456_004G154600 [Gossypium raimondii] | 706 | 004064 (22) | ref|XP_009766982.1| | 3e-91 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] |
JMFF033N13 | Sequence | 600 | 004064 (22) | ref|XP_009766982.1| | 9e-61 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] | 744 | 004064 (22) | ref|XP_009766982.1| | 3e-104 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] |
JMFF033N16 | Sequence | 551 | 004064 (22) | gb|KJB24635.1| | 4e-52 | hypothetical protein B456_004G154600 [Gossypium raimondii] | 651 | 004064 (22) | ref|XP_009766982.1| | 1e-88 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] |
JMFF038J01 | Sequence | 478 | 004064 (22) | gb|KJB24636.1| | 8e-28 | hypothetical protein B456_004G154600 [Gossypium raimondii] | 732 | 004064 (22) | ref|XP_009766982.1| | 1e-106 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] |
JMSF001M12 | Sequence | 248 | 004064 (22) | 743 | 004064 (22) | ref|XP_009766982.1| | 8e-107 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] | |||
JMSF007B07 | Sequence | 218 | 004064 (22) | 766 | 004064 (22) | ref|XP_009766982.1| | 2e-111 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] | |||
JMSF013E01 | Sequence | 266 | 004064 (22) | 714 | 004064 (22) | ref|XP_009766982.1| | 2e-95 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] | |||
JMSF024E07 | Sequence | 690 | 004064 (22) | ref|XP_006339640.1| | 8e-83 | PREDICTED: reticulon-like protein B1-like [Solanum tuberosum] | 751 | 015041 | ref|XP_009597328.1| | 8e-64 | PREDICTED: reticulon-like protein B5 [Nicotiana tomentosiformis] |
JMSF039C01 | Sequence | 729 | 004064 (22) | ref|XP_009766982.1| | 2e-90 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] | 856 | 004064 (22) | ref|XP_009766982.1| | 3e-116 | PREDICTED: reticulon-like protein B5 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
Contig15041 is a singlet.SCORE============================================Contig004064============================================1030 ============================================Contig015041============================================ ------------------------------------------------------------------>JMSF024E07# <--------------rJMFF015G17- --------------------------------------------------------->JMFF033N13** -------------------->JMSF007B07** <--------------------------------------------------------------rJMFF033N16** <-----------------------------------------------------------------------rJMSF001M12** ---------------------------------------------------->JMFF033N16** <---------------------------------------------------------------------rJMFF026K22** ------------------------------------------------->JMFF030L03** <----------------------------------------------------------------------rJMFF038J01** ---------------------------------------------------------------------->JMSF039C01** ----------------------->JMSF001M12** <-------------------------------------------------------------rJMSF039C01** ---------------------------------------------------->JMFF026K22** ------------------------>JMSF013E01** <-------------------------------------------------------------------------rJMSF007B07** <-------------------------------------------------------------------rJMFF030L03** ----------------------------------------------------->JMFF025K17** <---------------------------------------------------------rJMFF025K17** --------------------------------------------->JMFF038J01** <-----------------------------------------------------------------------rJMFF033N13** <-------------------------------------------------------------------rJMSF013E01**