clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF011G10 | Sequence | 617 | 002597 (15) | ref|XP_009598982.1| | 300 | PREDICTED: nucleoside diphosphate kinase 3-like [Nicotiana tomentosiformis] | 741 | 002597 (15) | gb|KCW72421.1| | 4e-120 | hypothetical protein EUGRSUZ_E00871 [Eucalyptus grandis] |
JMFF015H10 | Sequence | 556 | 002597 (15) | ref|XP_009598982.1| | 265 | PREDICTED: nucleoside diphosphate kinase 3-like [Nicotiana tomentosiformis] | 771 | 002597 (15) | ref|XP_010325356.1| | 380 | PREDICTED: nucleoside diphosphate kinase 3-like [Solanum lycopersicum] |
JMFF019N14 | Sequence | 276 | 002597 (15) | gb|ADF45668.1| | 6e-04 | nucleoside diphosphate kinase 1 [Solanum tuberosum] | 801 | 002597 (15) | ref|XP_010325356.1| | 376 | PREDICTED: nucleoside diphosphate kinase 3-like [Solanum lycopersicum] |
JMFF025D19 | Sequence | 548 | 002597 (15) | ref|XP_009598982.1| | 239 | PREDICTED: nucleoside diphosphate kinase 3-like [Nicotiana tomentosiformis] | 665 | 002597 (15) | gb|KCW72421.1| | 9e-94 | hypothetical protein EUGRSUZ_E00871 [Eucalyptus grandis] |
JMFF032A18 | Sequence | 536 | 002597 (15) | ref|XP_010325356.1| | 200 | PREDICTED: nucleoside diphosphate kinase 3-like [Solanum lycopersicum] | 805 | 002597 (15) | ref|XP_010325356.1| | 379 | PREDICTED: nucleoside diphosphate kinase 3-like [Solanum lycopersicum] |
JMFF035D14 | Sequence | 591 | 002597 (15) | ref|XP_009598982.1| | 129 | PREDICTED: nucleoside diphosphate kinase 3-like [Nicotiana tomentosiformis] | 692 | 002597 (15) | emb|CDX94238.1| | 1e-96 | BnaC02g28980D [Brassica napus] |
JMSF036A04 | Sequence | 700 | 002597 (15) | ref|XP_009598982.1| | 359 | PREDICTED: nucleoside diphosphate kinase 3-like [Nicotiana tomentosiformis] | 652 | 002597 (15) | gb|KCW72421.1| | 1e-111 | hypothetical protein EUGRSUZ_E00871 [Eucalyptus grandis] |
JMSF042L08 | Sequence | 676 | 024262 | ref|XP_010325356.1| | 104 | PREDICTED: nucleoside diphosphate kinase 3-like [Solanum lycopersicum] | 690 | 002597 (15) | gb|KCW72421.1| | 5e-110 | hypothetical protein EUGRSUZ_E00871 [Eucalyptus grandis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
Contig24262 is a singlet.SCORE============================================Contig024262============================================ ============================================Contig002597============================================1060 <------------------------------------------------------------rJMSF042L08# ------------------------->JMFF019N14** <------------------------------------------------------------------------rJMFF015H10** <---------------------------------------------------------------------------rJMFF019N14** <---------------------------------------------------------------------------rJMFF032A18** <-------------------------------------------------------------rJMSF036A04** --------------------------------------------------------->JMFF011G10** ----------------------------------------------------------------->JMSF036A04** <---------------------------------------------------------------------rJMFF011G10** -------------------------------------------------->JMFF032A18** <----------------------------------------------------------------rJMFF035D14** <--------------------------------------------------------------rJMFF025D19** --------------------------------------------------->JMFF025D19** ------------------------------------------------------->JMFF035D14** ---------------------------------------------------->JMFF015H10**