clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004E13 | Sequence | 406 | 005528 (11) | ref|XP_009761201.1| | 4e-28 | PREDICTED: ervatamin-B-like [Nicotiana sylvestris] | 754 | 005528 (11) | ref|XP_009609383.1| | 6e-86 | PREDICTED: ervatamin-B [Nicotiana tomentosiformis] |
JMFF014B09 | Sequence | 617 | 005528 (11) | ref|XP_009609383.1| | 1e-59 | PREDICTED: ervatamin-B [Nicotiana tomentosiformis] | |||||
JMFF028G23 | Sequence | 477 | 005528 (11) | ref|XP_009761201.1| | 4e-36 | PREDICTED: ervatamin-B-like [Nicotiana sylvestris] | 696 | 005528 (11) | ref|XP_009609383.1| | 2e-78 | PREDICTED: ervatamin-B [Nicotiana tomentosiformis] |
JMFF031H13 | Sequence | 523 | 005528 (11) | ref|XP_009761201.1| | 4e-46 | PREDICTED: ervatamin-B-like [Nicotiana sylvestris] | 666 | 005528 (11) | ref|XP_009609383.1| | 2e-52 | PREDICTED: ervatamin-B [Nicotiana tomentosiformis] |
JMFF032N18 | Sequence | 542 | 005528 (11) | ref|XP_009761201.1| | 1e-38 | PREDICTED: ervatamin-B-like [Nicotiana sylvestris] | 129 | 018036 | |||
JMFF036P23 | Sequence | 770 | 005528 (11) | ref|XP_009609383.1| | 2e-86 | PREDICTED: ervatamin-B [Nicotiana tomentosiformis] | |||||
JMFF045P13 | Sequence | 637 | 005528 (11) | ref|XP_009761201.1| | 8e-64 | PREDICTED: ervatamin-B-like [Nicotiana sylvestris] | 588 | 005528 (11) | ref|XP_009609383.1| | 2e-50 | PREDICTED: ervatamin-B [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005528============================================1204 5 ---------------------------------------------------->JMFF045P13 <------------------------------------------------rJMFF045P13 31 ------------------------------------------->JMFF031H13 <------------------------------------------------------rJMFF031H13 45 --------------------------------------->JMFF028G23 <---------------------------------------------------------rJMFF028G23 49 --------------------------------->JMFF004E13 <--------------------------------------------------------------rJMFF004E13
The following clones don't have the opposite end in this pair.
<---------------------------------------------------------------rJMFF036P23- -------------------------------------------->JMFF032N18# <--------------------------------------------------rJMFF014B09-