List of clones in pair P005541.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048C06Sequence265000269 (61)gb|AAD22104.1|2e-35B12D protein [Ipomoea batatas]634019180ref|XP_008340166.1|36.6PREDICTED: uncharacterized protein LOC103403120 [Malus domestica] ref|XP_0083618

Contig 269 BLAST Hits against nr-aa DB Show

Contig 19180 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

Contig19180 is a singlet.
SCORE============================================Contig000269============================================ 734         ============================================Contig019180============================================

                ----------------------------------------------------------------------->JMFN017B15-                   
           ---------------------------------------------------------------------------->JMFN030M23-                   
              ---------------------------------------------------------------------->JMFN025M15-                      
         ------------------------------------------------------------------------>JMFN039K09-                         
            ----------------------->JMFN033B10-                                                                       
           ------------------------------------------------------------------------->JMFN015K15-                      
                       --------------------------------------------------------------->JMFN019P16-                    
         ---------------------------------------------------------------------------->JMFN005P07-                     
       --------------------------------------------------------------------->JMFN038H01-                              
             --------------------------------------------------------------------->JMFF029K21-                        
             ------------------------------------------------------------------------->JMFN012F02-                    
         --------------------------------------------------------------------------->JMFS167B10-                      
       ------------------------------------------------------------------------------->JMFN013F23-                    
            --------------------------------------------------------------------------->JMFN043A21-                   
         --------------------------------------------------------------------------->JMFN032P13-                      
      <-----------------------------------------------------------------------rJMSF049P21*                            
        --------------------------------------------------------------------->JMFN004B14-                             
         --------------------------------------------------------------------------->JMFN006H08-                      
     ----------------------------------->JMFF048C06#                                                                  
           ------------------------------------------>JMFN042N18-                                                     
         ---------------------------------------------------------------------------->JMFN008J10-                     

          <-------------------------------------------------------------------------rJMFF003N21**
     <-----------------------------------------------------------------------------rJMFF029C10**
             <--------------------------------------------------------------------rJMFF029L21**
     ---------------------------------------------------------------------------->JMFF033N19**
       --------------------------------------------------------->JMFF048D06**
          ---------------------------------------------------------------------------->JMSF049A18**
      ----------------------------------------------------------------------->JMFF006B01**
             ------------------------------------------------------------------------->JMFF002E23**
                                    <------------------------------------------------rJMFF048D06**
      ------------------------------------------------------------------------------->JMSF048P21**
      <------------------------------------------------------------------------------rJMFF006B01**
      <-----------------------------------------------------------------------------rJMFF021P20**
             --------------------------------------------------------------------->JMFF029K22**
             ----------------------------------------------------------------->JMFF029L13**
      -------------------------------------------------------------->JMFF021P20**
       ----------------------------------------------------------------------->JMFF028H21**
                          <------------------------------------------------------------rJMFF049A13**
                 <------------------------------rJMFF002E23**
          <----------------------------------------------------------------------rJMSF049A18**
          <---------------------------------------------------------------------rJMSF049N15**
          <-------------------------------------------------------------------------------------------rJMFF036H23**
     ------------------------------------------------------------------------->JMFF029C10**
      -------------------------------------------------------------------->JMFF049A13**
                      <----------------------------------------------------------------------------------rJMFF043M06**
             ----------------------------------------------------------------->JMFF029L21**
      ------------------------------------------------------------------------------>JMFF043M06**
             <----------------------------------------------------------------------rJMFF029K22**
     <-----------------------------------------------------------------------------rJMFF033N19**
          --------------------------------------------------------------------------->JMSF049N15**
                 <--------------------------------------------------------rJMFF029L13**
       <--------------------------------------------------------------------------rJMFF028H21**
             ------------------------------------------------------------------------->JMFF029L22**
          --------------------------------------------------------------------->JMFF003N21**
     --------------------------------------------------------------------------------->JMFF012C18**
     ------------------------------------------------------------------------->JMFF036H23**
      <-------------------------------------------------------------------------rJMSF048P21**
      <----------------------------------------------------------------------------rJMFF006O15**
      ------------------------------------------------------------------------------>JMFF006O15**
                 <--------------------------------------------------------rJMFF029L22**
     <-----------------------------------------------------------------------------rJMFF012C18**