List of clones in pair P005492.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005P16Sequence231006385 (80)pir||S426434e-27ubiquitin / ribosomal protein S27a - potato (fragment)345004008 (15)ref|XP_010242951.1|6e-08PREDICTED: expansin-B3-like [Nelumbo nucifera]

Contig 6385 BLAST Hits against nr-aa DB Show

Contig 4008 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig006385============================================1253         ============================================Contig004008============================================1247
  66 ----------------->JMSF005P16                                                                                                                                                        <---------------------------rJMSF005P16  
                                 <-------------------------------------------------------------rJMFF038K07*           
                            -------------------------------------------------->JMFN032P06-                            
       ------------------------------------------------>JMFS092F03-                                                   
                                                                            --------------------->JMFS133F02-         
                          <--------------------------------------------------------------------rJMFF003K01-           
                                   <-------------------------------------------------------------------rJMFF038M12*   
                                   -------------------------------------------------->JMFN003L23-                     
                                    -------------------------------------------------->JMFN005M07-                    
                                              -------------------------->JMFS046F03-                                  
     ------------------------------------------------------->JMFF028K01-                                              
       ------------------------------------------------>JMFN012O04-                                                   
                                     <---------------------------------------------------------rJMFF009G20-           
                                      <-------------------------------------------------------------rJMFF013J04-      
                                                                                                                                                                        <-------------------------------------------------rJMFF021A20- 
                                                                                                                       -------------------->JMSF005P14-  
                                  <-----------------------------------------------------------------rJMFF002F16**
      ----------------------------------------------------->JMFF033E08**
     ----------------------------------------------------------->JMFF009B16**
                          <----------------------------------------------------------------------rJMFF033G20**
                            <-----------------------------------------------------------------------rJMFF013I06**
                          <---------------------------------------------------------------------rJMFF033E08**
     --------------------------------------------------------->JMFF002D04**
                             <------------------------------------------------------------------rJMFF022O21**
      ------------------------------------------------------------>JMFF004O05**
                                   <-------------------------------------------------------------rJMFF009B16**
                                    <----------------------------------------------------------rJMFF012M06**
      --------------------------------------------------------->JMFF012M06**
     ------------------------------------------->JMFF050N18**
                         <----------------------------------------------------------------------rJMFF009M19**
      ----------------------------------------------->JMFF030K16**
                                                                                              <--------rJMFF014G10**
                                                <-----------------------------------------------rJMFF030K16**
      ----------------------------------------------------------->JMFF018D01**
                                   <------------------------------------------------------------------rJMFF031L09**
     ---------------------------------------------------------->JMFF026H09**
     ----------->JMFF048O20**
     ----------------------------------------------------------->JMFF013I06**
                             <-----------------------------------------------------------------rJMFF036A22**
                         <----------------------------------------------------------------------rJMFF010N12**
                                                                                     <------------rJMSF036G11**
     -------------------------------------------------------->JMFF036P16**
     --------------------------------------------------------->JMFF016O09**
      ------------------------------------------------->JMFF036A22**
     ---------------------------------------------------->JMFF045O22**
     ------------------------------------------------------------->JMFF031L09**
                                  <------------------------------------------------------------------rJMFF001O16**
     ---------------------------------------------------------->JMFF009M19**
                                     <-----------------------------------------------------------------rJMFF036P16**
      ----------------------------------------------------------->JMFF038H23**
                                  <-------------------------------------------------------------rJMFF018D01**
                                                                                              ---------->JMFF014G10**
                                                                    <---------------------------rJMFF048O19**
     ---------------------------------------------------->JMFF002F16**
     ------------------------------------------------------------->JMFF001D21**
     ------------------------------------------------------->JMFF012I01**
                                                   <----------------------------------------------rJMFF045O22**
     ----------------------------------------->JMFF048O19**
                                            <---------------------------------------------------rJMFF021C20**
     ---------------------------------------------------->JMFF039G24**
                                <----------------------------------------------------------------------rJMFF016O09**
                                                                 <-------------------------------------rJMFF050N18**
                                 <--------------------------------------------------------------------rJMFF004O05**
                                  <--------------------------------------------------------------------rJMFF012I01**
     ---------------------------------------------------------->JMFF028F09**
                                                                      <--------------------------rJMFF048O20**
      ---------------------------------------------------->JMFF021C20**
                                      <--------------------------------------------------------rJMFF007N04**
                             <----------------------------------------------------------------rJMSF022H17**
                                <---------------------------------------------------------------rJMFF038H23**
     ---------------------------------------------------->JMFF001O16**
                                <----------------------------------------------------------------------rJMFF001D21**
                                                                                     --------------->JMSF036G11**
                         <---------------------------------------------------------------------rJMFF028F09**
                            <------------------------------------------------------------------rJMFF026H09**
     ------------------------------------------------>JMFF007N04**
      --------------------------------------------------------->JMFF010N12**
      ---------------------------------------------------------->JMFF033G20**
                                           <-----------------------------------------------------------rJMFF039G24**
                                 <---------------------------------------------------------------------rJMFF002D04**
      ----------------------------->JMFF022O21**
     --------------------------------------------------------->JMSF022H17**
                                                                                                                                                                    <--------------------------------------------------rJMSF034K23**
                                                                                                                      ---------------------------------------------->JMFF047F12**
                                                                                                                                                        <-------------------------------------------------------------rJMFF034J05**
                                                                                                                      ----------------------------------------------------->JMSF034K23**
                                                                                                                                                                     <-----------------------------------------------rJMSF046A12**
                                                                                                                                                        <-------------------------------------------------------------rJMSF051L11**
                                                                                                                                                 <--------------------------------------------------------------------rJMSF052L11**
                                                                                                                      ----------------------------------->JMSF052L11**
                                                                                                                      ----------------------------------------------------->JMSF046A12**
                                                                                                                                                                            <---------------------------------------------rJMFF047F12**
                                                                                                                      -------------------------------------->JMFF034J05**
                                                                                                                      ------------------------------------------------------>JMSF051L11**