List of clones in pair P005236.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039A04Sequence524005274 (39)ref|XP_008387657.1|3e-115PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming]-like [Malus d724017003gb|AGC97433.2|2e-68cellulose synthase [Boehmeria nivea]

Contig 5274 BLAST Hits against nr-aa DB Show

Contig 17003 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

Contig17003 is a singlet.
SCORE============================================Contig005274============================================2727         ============================================Contig017003============================================

                        --------------------->JMFS157H04-                                                             
                                        ------------->JMFS126A01-                                                     
        --------------------->JMFS096E01-                                                                             
                                                       <---------------------rJMFF046M02*                             
                                                                      ---------------------->JMFS126H12-              
                                   ---------------------->JMFS059H09-                                                 
         -------------------->JMFF028C17*                                                                             
                 ---------------------->JMFS143C02-                                                                   
         ---------------------->JMFF019I05*                                                                           
         ----------------------->JMFF051G11*                                                                          
          --------------->JMFS162H01-                                                                                 
                                                     <----------------------rJMFF042A02*                              
                                                                                               --------->JMFF012B07*  
                                                                     ------------------->JMFS097G10-                  
       ------------------->JMFS142G03-                                                                                
        ---------------------->JMFS058F12-                                                                            
                               -------------------->JMFS016A06-                                                       
         -------------->JMFS004B06-                                                                                   
          ---------------------->JMFS143B12-                                                                          
                       ---------------------->JMFS096A09-                                                             
                     ---------------------->JMFS139D08-                                                               
                                                                                   ---------------->JMFS060G12-       
                         ---------------------->JMFS155H08-                                                           
                                    ---------------------->JMFS135A10-                                                
                      ---------------------->JMFS042B11-                                                              
           --------------------->JMFS048G06-                                                                          
     --------------------------->JMSF045H17-                                                                          
     --------------------->JMFS084B11-                                                                                
            --------------->JMFS037G09-                                                                               
          -------------------->JMFS012E12-                                                                            
          ----------------------->JMFS118D01-                                                                         
       -------------->JMFF005H11*                                                                                     
         ---------------------->JMFS066G11-                                                                           
          ---------------------->JMFS064D05-                                                                          
     ---------------------->JMFS069G01-                                                                               
       ------------------->JMFS078H11-                                                                                
                         -------------------->JMFS005F06-                                                             
                                                    ------------------>JMFF039A04#                                    
                                                      <----------------------rJMFF042F02*