clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF044F12 | Sequence | 761 | 019012 | gb|AIF35255.1| | 9e-153 | phosphoenolpyruvate carboxylase, partial [Allenrolfea sp. BRU Christin s.n.] | 454 | 007770 (81) | gb|ABX84141.1| | 1e-74 | rubisco activase [Ipomoea batatas] gb|AFU50385.1| chloroplast ribulose bisphosph |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
Contig19012 is a singlet.SCORE============================================Contig019012============================================ ============================================Contig007770============================================1691 --------------------------------------->JMSF050O04* <----------------------------rJMSF043H17- --------------------------------->JMFN016H10- ----------------------->JMSF009G16* <-----------------------------rJMSF047J23- <--------------------------rJMSF044F12# ------------------------------------>JMFN032L19- ----------------------------------->JMFF009J24** --------------------------------->JMFF019G05** ------------------->JMSF004G22** -------------------------------------->JMSF028D06** <------------------------------------------rJMFF027B21** <--------------------------------------------rJMSF045J23** <---------------------------------------------rJMFF006G03** --------------------------------->JMFF007E22** <----------------------------------------------rJMSF045E20** --------------------------------------->JMSF045N02** <------------rJMSF004G22** <-------------------------------------------rJMSF024I15** <--------------------------------------------rJMSF028D06** --------------------------------------------->JMSF042H17** ------------------------------------->JMSF045J23** <---------------------------------------------rJMSF012E03** --------------------------------->JMFF027M24** ------------>JMSF015D24** ---------------------------->JMFF040F06** ----------------------------->JMFF046B02** --------------------------------------->JMSF041C15** <------------------------------------------rJMFF007P06** <------------rJMSF046N10** ---------------------------->JMFF029F19** <----------------------------------------------------rJMSF052G23** <----------------------------------------------rJMSF014M21** <-------------------------------------rJMSF041C15** <----------------------------------------rJMFF027M24** -------------------------------------->JMSF050C24** <-----------------------------------rJMFF051O04** ------------------->JMSF002I05** ------------->JMSF004B07** -------------------------------->JMFF027B21** ------------------------------>JMFF046N17** <-----------------------------------------rJMSF045N02** <--------------------------------------------rJMFF040F06** <--------------------------------------------rJMSF020K08** ------------->JMSF012E03** -------------------------------------->JMSF030P15** <----------------------------------------------rJMSF023P10** ------------->JMSF009B12** <----------------------------------------------rJMSF030P15** ------------------------------>JMFF038H09** <--------------------------------------------rJMSF007N23** <------------------------------------------rJMSF037L10** ------------------>JMSF007N23** <--------------------------------------------rJMSF015D24** <-------------------------------------------rJMSF002I05** ------------------->JMSF018D04** <--------------------------------------------rJMSF042H17** ---------------------------------->JMSF023P10** <-----------------------------rJMFF046B02** ------------------------------------->JMSF020K08** -------------------------------------->JMFF041N09** <--------------------------------------------rJMSF018D04** --------------------------------->JMFF007P06** ---------------------------->JMSF014M21** --------------->JMSF046N10** <----------------------------------------rJMFF009J24** <-----------------------------------rJMFF041N09** <------------------------------------------rJMFF007E22** ------------------------------------>JMFF051O04** --------------------------------------->JMSF045E20** <---------------------------rJMFF046N17** <------------------------------------------rJMFF019G05** <-------------------------------rJMFF029F19** <------------------------------------------rJMSF050C24** <------------------rJMSF004B07** --------------------------------->JMFF006G03** ----------------------------------->JMSF052G23** <---------------------------------------rJMFF038H09** <----------------------------------------------rJMSF009B12** -------------------------------------->JMSF024I15** -------------------------------------->JMSF037L10**