List of clones in pair P004916.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001J07Sequence427003570 (41)ref|XP_006366817.1|2e-59PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu643003570 (41)ref|XP_006366818.1|7e-92PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFF005F04Sequence376003570 (41)ref|XP_006366817.1|3e-58PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu750003570 (41)ref|XP_006366818.1|6e-106PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFF005F06Sequence432003570 (41)ref|XP_006366817.1|4e-67PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu763003570 (41)ref|XP_006366818.1|9e-107PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFF015L23Sequence366003570 (41)ref|XP_006366817.1|4e-57PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFF020M09Sequence488003570 (41)ref|XP_006366817.1|5e-59PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu736003570 (41)ref|XP_006366818.1|7e-106PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFF034L12Sequence507003570 (41)ref|XP_006366817.1|5e-59PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu748003570 (41)ref|XP_006366818.1|6e-107PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFF036C03Sequence532003570 (41)ref|XP_006366817.1|1e-58PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu601003570 (41)ref|XP_006366818.1|2e-85PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFF043K01Sequence636003570 (41)ref|XP_006366818.1|3e-99PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu455003570 (41)ref|XP_010268316.1|1e-44PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Nelumbo nuc
JMFN004D02Sequence611003570 (41)ref|XP_006366818.1|3e-97PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN004L06Sequence631003570 (41)ref|XP_006366818.1|2e-90PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN007D09Sequence627003570 (41)gb|AFW90576.1|1e-100photosystem I subunit XI Mrna (chloroplast) [Solanum tuberosum]
JMFN007K01Sequence627003570 (41)ref|XP_006366818.1|4e-98PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN008F05Sequence652003570 (41)ref|XP_006366818.1|2e-107PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN009K10Sequence616003570 (41)ref|XP_006366818.1|1e-101PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN012D21Sequence639003570 (41)ref|XP_006366818.1|6e-99PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN012P24Sequence633003570 (41)ref|XP_006366818.1|9e-103PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN014M12Sequence627003570 (41)ref|XP_006366818.1|3e-97PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN016M07Sequence624003570 (41)ref|XP_006366818.1|1e-99PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN019F10Sequence412003570 (41)ref|XP_006366818.1|9e-63PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN019H10Sequence618003570 (41)ref|XP_006366818.1|2e-99PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN028B08Sequence590003570 (41)ref|XP_006366818.1|1e-90PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN028P13Sequence627003570 (41)ref|XP_006366818.1|9e-85PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN030N15Sequence615003570 (41)ref|XP_006366818.1|9e-98PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN034A22Sequence624003570 (41)ref|XP_006366818.1|2e-76PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN034B06Sequence628003570 (41)ref|XP_006366818.1|7e-102PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN035F11Sequence664003570 (41)ref|XP_006366818.1|5e-102PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN036C11Sequence525003570 (41)ref|XP_006366818.1|8e-65PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN039P07Sequence546003570 (41)ref|XP_006366818.1|4e-70PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMFN040J08Sequence555003570 (41)ref|XP_006366818.1|1e-96PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMSF003G02Sequence203003570 (41)ref|XP_002527284.1|7e-04Photosystem I reaction center subunit XI, chloroplast precursor, putative [Rici144003570 (41)ref|XP_002527284.1|4e-04Photosystem I reaction center subunit XI, chloroplast precursor, putative [Rici
JMSF009J04Sequence277003570 (41)ref|XP_006366817.1|8e-29PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu746003570 (41)ref|XP_006366818.1|2e-106PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu
JMSF027M10Sequence664003570 (41)ref|XP_006366818.1|1e-101PREDICTED: photosystem I reaction center subunit XI, chloroplastic-like [Solanu724016114ref|XP_006573726.1|49.3PREDICTED: uncharacterized protein LOC102662187 [Glycine max]

Contig 3570 BLAST Hits against nr-aa DB Show

Contig 16114 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

Contig16114 is a singlet.
SCORE============================================Contig003570============================================ 853         ============================================Contig016114============================================

                                   --------------------------------------------------------------->JMFN039P07-        
                ----------------------------------------------------------------------->JMFN009K10-                   
        ----------------------------------------------------------------------------->JMSF027M10#                     
             ------------------------------------------------------------------------>JMFN019H10-                     
                   ------------------------------------------------------------------------->JMFN004L06-              
                            ------------------------------------------------------------------------>JMFN028P13-      
            ------------------------------------------------------------------------->JMFN012P24-                     
             ------------------------------------------------>JMFN019F10-                                             
             ------------------------------------------------------------------------->JMFN034B06-                    
             ----------------------------------------------------------------------->JMFN030N15-                      
            ----------------------------------------------------------------------->JMFN004D02-                       
                                <------------------------------------------------------------------------JMFN034A22-  
          ------------------------------------------------------------------------->JMFN014M12-                       
     ------------------------------------------------------------------------->JMFN007D09-                            
             ---------------------------------------------------------------->JMFN040J08-                             
                                     ------------------------------------------------------------->JMFN036C11-        
             ------------------------------------------------------------------------>JMFN016M07-                     
       ------------------------------------------>JMFF015L23-                                                         
               ---------------------------------------------------------------------------->JMFN035F11-               
         -------------------------------------------------------------------------->JMFN012D21-                       
            ---------------------------------------------------------------------------->JMFN008F05-                  
           ------------------------------------------------------------------------->JMFN007K01-                      
             -------------------------------------------------------------------->JMFN028B08-                         

     <--------------------------------------------------------------------------------------rJMSF009J04**
          ------------------------------------------------->JMFF001J07**
         ------------------------------------------->JMFF005F04**
           <-------------------------------------------------------------------------------------rJMFF020M09**
          -------------------------------------------------------->JMFF020M09**
                                                                              --------------------->JMSF003G02**
                           <----------------------------------------------------------------------rJMFF036C03**
          ------------------------------------------------------------->JMFF036C03**
          <---------------------------------------------------------------------------------------rJMFF034L12**
                       <-------------------------------------------------------------------------rJMFF001J07**
          ---------------------------------------------------------->JMFF034L12**
                                                                              <--------------rJMSF003G02**
                                               <-----------------------------------------------------rJMFF043K01**
        <-----------------------------------------------------------------------------------------rJMFF005F06**
     ------------------------------------------------->JMFF005F06**
          -------------------------------------------------------------------------->JMFF043K01**
     ------------------------------->JMSF009J04**
           <---------------------------------------------------------------------------------------rJMFF005F04**