List of clones in pair P004223.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001I01Sequence312007407 (31)ref|XP_004302291.1|5e-18PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Fr269017043ref|XP_008246198.1|4e-12PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic iso

Contig 7407 BLAST Hits against nr-aa DB Show

Contig 17043 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

Contig17043 is a singlet.
SCORE============================================Contig007407============================================1740         ============================================Contig017043============================================

                                                                 <-------------------------------------rJMSF027I06*   
                        ----------------------------------->JMSF026K05-                                               
                        ---------------->JMSF010K24-                                                                  
                        ------------------------>JMSF006I14-                                                          
                          ------------------------------------->JMSF020C02*                                           
                        ----------------->JMSF001I01#                                                                 
                        ----------------->JMSF004M10*                                                                 

                                                                      <--------------------------------rJMSF002M06**
                        ----------------------------------->JMFF049B15**
                        ----------------------------------->JMSF031B06**
                                                                                     <-----------------rJMSF042O21**
     --------------------------->JMFF030A18**
                        ------------->JMSF019L13**
                                                                      <-------------------------------rJMSF001M21**
                        -------------------------------->JMFF030J04**
                                                           <-------------------------------------------rJMSF052C08**
                                                                                         <-------------rJMFF030J04**
                                                                    <----------------------------------rJMSF031B06**
                                                                         <------------------------------rJMFF001K06**
                        ------------------------------------------->JMSF042O21**
                                                                         <-------------------------------rJMFF044D20**
                         ---------------------------------->JMSF052C08**
                        ------------------>JMSF010C02**
                                                                    <---------------------------------rJMSF010C02**
                                                                      <--------------------------------rJMSF019L13**
                        ------------------------------>JMFF001K06**
                         ------------------------------------>JMFF044D20**
                        ------------>JMSF001M21**
                        -------------------->JMSF002M06**
                                                                                          <-------------rJMFF030A18**
                                                                      <----------------------------------rJMFF049B15**