clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004B11 | Sequence | 585 | 009741 (14) | gb|ACY24906.1| | 5e-74 | gamma TMT [Solanum tuberosum] | 741 | 009741 (14) | gb|ABE41795.1| | 3e-116 | gamma-tocopherol methyltransferase [Solanum tuberosum] |
JMFF009L18 | Sequence | 578 | 009741 (14) | gb|ACY24906.1| | 4e-59 | gamma TMT [Solanum tuberosum] | 756 | 024321 | ref|XP_009619685.1| | 1e-55 | PREDICTED: probable tocopherol O-methyltransferase, chloroplastic isoform X1 [N |
JMFF011F09 | Sequence | 511 | 009741 (14) | gb|ACY24906.1| | 8e-58 | gamma TMT [Solanum tuberosum] | 731 | 009741 (14) | gb|ABE41795.1| | 7e-110 | gamma-tocopherol methyltransferase [Solanum tuberosum] |
JMFF018H03 | Sequence | 571 | 009741 (14) | ref|XP_009795242.1| | 3e-24 | PREDICTED: probable tocopherol O-methyltransferase, chloroplastic [Nicotiana sy | 766 | 009741 (14) | gb|ABE41795.1| | 9e-144 | gamma-tocopherol methyltransferase [Solanum tuberosum] |
JMFF028C12 | Sequence | 505 | 009741 (14) | gb|ACY24906.1| | 3e-57 | gamma TMT [Solanum tuberosum] | 685 | 009741 (14) | ref|XP_009619685.1| | 5e-83 | PREDICTED: probable tocopherol O-methyltransferase, chloroplastic isoform X1 [N |
JMFF035O02 | Sequence | 493 | 009741 (14) | gb|AEP68180.1| | 1e-54 | gamma-tocopherol methyltransferase [Perilla frutescens] | 782 | 009741 (14) | ref|XP_009619685.1| | 3e-103 | PREDICTED: probable tocopherol O-methyltransferase, chloroplastic isoform X1 [N |
JMSF002E11 | Sequence | 347 | 009741 (14) | 740 | 009741 (14) | gb|ADC44439.1| | 7e-115 | gamma-tocopherol methyltransferase [Solanum lycopersicum var. cerasiforme] gb|A | |||
JMSF027A04 | Sequence | 729 | 009741 (14) | gb|ABE41795.1| | 4e-122 | gamma-tocopherol methyltransferase [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
Contig24321 is a singlet.SCORE============================================Contig009741============================================1549 ============================================Contig024321============================================ <----------------------------------------------rJMSF027A04- -------------------------------->JMFF009L18# <----------------------------------------------rJMFF011F09** <-------------------------------------------rJMFF028C12** <-------------------------------------------------rJMFF035O02** <------------------------------------------------rJMFF018H03** ------------------------------->JMFF035O02** ------------------------------------->JMFF004B11** <-----------------------------------------------rJMFF004B11** -------------------------------->JMFF011F09** ------------------------------->JMFF028C12** --------------------->JMSF002E11** ------------------------------------>JMFF018H03** <----------------------------------------------rJMSF002E11**