List of clones in pair P002893.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025M18Sequence693002452 (4)gb|KDP22086.1|9e-42hypothetical protein JCGZ_25917 [Jatropha curcas]755000235 (181)ref|XP_004170962.1|1e-155PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like
JMSF031N09Sequence625002452 (4)gb|KDP22086.1|6e-25hypothetical protein JCGZ_25917 [Jatropha curcas]749000235 (181)ref|XP_004170962.1|7e-155PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like

Contig 2452 BLAST Hits against nr-aa DB Show

Contig 235 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002452============================================ 707         ============================================Contig000235============================================1010
  63   ------------------------------------------------------------------------------------------------->JMSF025M18                       <--------------------------------------------------------------------------rJMSF025M18  
  75   --------------------------------------------------------------------------------------->JMSF031N09                                  <------------------------------------------------------------------------rJMSF031N09  
     --------------------------------------------------------------------------------------------------->JMSF048K20*  
      ------------------------------------------------------------>JMFF022M13*                                        
                                                                                                                         -------------------------------------------------------------->JMFN008G20-  
                                                                                                                                     <---------------------------------------------------------------------------rJMSF021J23* 
                                                                                                                        -------------------------------------------------------------->JMFN017L08-  
                                                                                                                         ----------------------------------------------------------->JMFS088A03-  
                                                                                                                         ----------------------------------------------------------->JMFS099B07-  
                                                                                                                                                                <----------------------------------------------------JMFN030N08-  
                                                                                                                                                                                           <----------------rJMSF049M20- 
                                                                                                                                                                         <----------------------------rJMFF037A05* 
                                                                                                                                                                      <----------------------------------------rJMFF030M20- 
                                                                                                                         -------------------------------------------------------------->JMFN013E02-  
                                                                                                                                      <--------------------------------------------------------------------------rJMSF047O05* 
                                                                                                                                                                          <-------------------------------------rJMSF006O15* 
                                                                                                                                       ------------------------------------------------------------>JMFN006D08-  
                                                                                                                         ------------------------------------------------------------->JMFS102E07-  
                                                                                                                       ------------------------------------------->JMSF008F17-  
                                                                                                                         ------------------------------------------------------>JMFS103C08-  
                                                                                                                                    <----------------------------------------------------------------------------rJMSF007H09* 
                                                                                                                        ------------------------------------------------------------>JMFN037E19-  
                                                                                                                                                             ------------------------------------------------------>JMFS033C02-  
                                                                                                                         -------------------------------------------------------->JMFS048D04-  
                                                                                                                        -------------------------------------------------------------->JMFS115H10-  
                                                                                                                      -------------------------->JMSF006O13-  
                                                                                                                                                            <-------------------------------------------------------JMFN018E22-  
                                                                                                                        ------------------------------------------------------------>JMFN014I15-  
                                                                                                                                                                  <----------------------------------------------rJMFF003C24- 
                                                                                                                                                                              <--------------------------------rJMFF013M21- 
                                                                                                                                                                     ---------------------------------------------->JMFN012K19-  
                                                                                                                         --------------------------------------------------------->JMFN017P04-  
                                                                                                                        -------------------------------------------------------------->JMFN010O04-  
                                                                                                                                              <------------------------------------------------------------------rJMSF026M16* 
                                                                                                                       --------------------------------------------->JMSF013M07#  
                                                                                                                        -------------------------------------------------------------->JMFS061G02-  
                                                                                                                         -------------------------------------------------------------->JMFN006P06-  
                                                                                                                            ---------------------------------------->JMFN016K18-  
                                                                                                                        ----------------------------------------------------------->JMFN030A02-  
                                                                                                                       -------------------->JMSF012C24*  
                                                                                                                         ------------------------------------------------>JMFS158G06-  
                                                                                                                       ------------------------------>JMSF006K24-  
                                                                                                                                                             ------------------------------------------------------>JMFS043B11-  
                                                                                                                      -------------------------------------------------------->JMSF025H17-  
                                                                                                                         ------------------------------------------------------------->JMFN011L18-  
                                                                                                                                       ------------------------------------------------------------>JMFN009D05-  
                                                                                                                          -------------------------------------------------------------->JMFN005C09-  
                                                                                                                         --------------------------------------------------------->JMFN018P05-  
                                                                                                                                                             <--------------------------------------rJMSF043B16- 
                                                                                                                                   <-------------------------------------------------------------------------------------rJMSF052G19**
                                                                                                                                               <-----------------------------------------------------------------rJMFF036K09**
                                                                                                                                         <-------------------------------------------------------------------------rJMFF032A06**
                                                                                                                       ------------------------------------------------------->JMFF025F24**
                                                                                                                                         <----------------------------------------------------------------------rJMSF048N05**
                                                                                                                               <---------------------------------------------------------------------------------rJMSF042F09**
                                                                                                                       ----------------------------------------------------------------->JMSF038E23**
                                                                                                                       ----------------------------------------------------->JMFF022B14**
                                                                                                                                          <----------------------------------------------------------------------rJMFF016C15**
                                                                                                                                    <----------------------------------------------------------------------------rJMSF015P15**
                                                                                                                                     <--------------------------------------------------------------------------rJMSF002N06**
                                                                                                                      ----------------------------------------------------------------->JMSF037H11**
                                                                                                                                     <---------------------------------------------------------------------------rJMSF047K09**
                                                                                                                      --------------------------------------------------------------->JMSF034L09**
                                                                                                                                                      <---------------------------------------------------------------rJMFF025H07**
                                                                                                                                    <----------------------------------------------------------------------------rJMSF022D03**
                                                                                                                       ------------------------------------------>JMFF010J11**
                                                                                                                                         <------------------------------------------------------------------------rJMFF016M24**
                                                                                                                                      <-------------------------------------------------------------------------rJMSF030P07**
                                                                                                                       ---------------------------------------------->JMFF003I05**
                                                                                                                      --------------------------------------------------------------->JMFF042F03**
                                                                                                                       --------------------------------------------------------------------------->JMSF041K21**
                                                                                                                       --------------------------------------------------------------->JMSF039H13**
                                                                                                                               <----------------------------------------------------------------------------------rJMSF040P20**
                                                                                                                      ---------------------------------------------------------------------->JMSF042F09**
                                                                                                                       --------------------------------------------------------------->JMSF037N01**
                                                                                                                                          <----------------------------------------------------------------------rJMFF013M10**
                                                                                                                       ------------------------------------>JMSF002N06**
                                                                                                                       ------------------------------------------------------>JMFF008N20**
                                                                                                                      ----------------------------------->JMSF007C22**
                                                                                                                                   <----------------------------------------------------------------------------rJMSF026L18**
                                                                                                                      ----------------------------------------------------------------->JMSF047K06**
                                                                                                                       ---------------------------------->JMSF008L08**
                                                                                                                                   <----------------------------------------------------------------------------rJMSF001F06**
                                                                                                                      -------------------------->JMSF016H19**
                                                                                                                      ----------------------------------------------------------------->JMSF048E05**
                                                                                                                                               <-----------------------------------------------------------------rJMSF033N19**
                                                                                                                                         <----------------------------------------------------------------------rJMSF043J21**
                                                                                                                                      <--------------------------------------------------------------------------rJMSF045H15**
                                                                                                                                                <---------------------------------------------------------------rJMSF037N01**
                                                                                                                       ----------------------------------------------->JMFF016C15**
                                                                                                                       --------------------------------------------->JMSF015P15**
                                                                                                                      ----------------------------------------------------------->JMSF040P20**
                                                                                                                                                      <---------------------------------------------------------rJMSF006H09**
                                                                                                                                         <----------------------------------------------------------------------rJMSF011M21**
                                                                                                                       ----------------------------------------------------------->JMSF019J06**
                                                                                                                                         <----------------------------------------------------------------------rJMSF022C13**
                                                                                                                                    <---------------------------------------------------------------------------rJMSF037H11**
                                                                                                                                      <-----------------------------------------------------------------------rJMSF002F06**
                                                                                                                                     <----------------------------------------------------------------------------rJMSF019G18**
                                                                                                                                         <----------------------------------------------------------------------rJMSF024I07**
                                                                                                                      --------------------------------------------->JMSF001F06**
                                                                                                                      -------------------------------------------->JMSF002F06**
                                                                                                                       --------------------------------------------------------------->JMSF025M22**
                                                                                                                                                         <-----------------------------------------------------------------rJMFF028A13**
                                                                                                                                  <------------------------------------------------------------------------------rJMSF016H19**
                                                                                                                                   <----------------------------------------------------------------------------rJMSF016I18**
                                                                                                                       ------------------------------------------------------->JMFF036K09**
                                                                                                                                         <-----------------------------------------------------------------------rJMFF028H08**
                                                                                                                                <---------------------------------------------------------------------------rJMSF052J08**
                                                                                                                       ----------------------------------------------------------------->JMSF022D03**
                                                                                                                       ------------------------------------------------------>JMFF016M24**
                                                                                                                                    <---------------------------------------------------------------------------rJMSF046I16**
                                                                                                                                <-------------------------------------------------------------------------------rJMSF018D15**
                                                                                                                                      <--------------------------------------------------------------------------rJMSF013K21**
                                                                                                                      --------------------------------------------------------------->JMSF052G19**
                                                                                                                                         <-----------------------------------------------------------------------rJMSF051M12**
                                                                                                                      ------------------------>JMSF011M21**
                                                                                                                       ---------------------------------------------------------------->JMSF049I17**
                                                                                                                      ----------------------------------------------------------------->JMSF047K09**
                                                                                                                                   <----------------------------------------------------------------------------rJMSF015N09**
                                                                                                                                   <----------------------------------------------------------------------------rJMSF013D16**
                                                                                                                       ------------------------------------------------------>JMFF028H08**
                                                                                                                       ---------------------------------------------->JMFF025H07**
                                                                                                                       ------------------------------------------->JMSF006H09**
                                                                                                                      --------------------------------------------------------------->JMSF052A14**
                                                                                                                       -------------------------------------------->JMSF017O12**
                                                                                                                       ---------------------------------------------------------------------------->JMSF043J21**
                                                                                                                                                   <-----------------------------------------------------------------rJMFF010J11**
                                                                                                                               <--------------------------------------------------------------------------------rJMSF039O08**
                                                                                                                      ------------------------------------------------------------------------------>JMSF046I16**
                                                                                                                                                                              <------------------------------------------rJMSF049A19**
                                                                                                                       ---------------------------------------------------------------->JMSF039D13**
                                                                                                                                         <----------------------------------------------------------------------rJMSF047K06**
                                                                                                                       ---------------------------------------------->JMFF028A13**
                                                                                                                       ---------------------------------------------------------------->JMSF048N05**
                                                                                                                                                <--------------------------------------------------------------------rJMSF019J06**
                                                                                                                                                                    <------------------------------------------------rJMFF042F03**
                                                                                                                                               <------------------------------------------------------------------rJMFF003I05**
                                                                                                                       ----------------------------------------------------------------->JMSF026N16**
                                                                                                                                     <---------------------------------------------------------------------------rJMSF007C22**
                                                                                                                                          <---------------------------------------------------------------------rJMSF034L09**
                                                                                                                                     <---------------------------------------------------------------------------rJMSF025M22**
                                                                                                                           <------------------------------------------------------------------------------------rJMSF039D13**
                                                                                                                       <----------------------------------------------------------------------------------------rJMSF039H13**
                                                                                                                                   <----------------------------------------------------------------------------rJMSF026N16**
                                                                                                                       --------------------------------------------->JMFF031L08**
                                                                                                                                      <--------------------------------------------------------------------------rJMSF049I17**
                                                                                                                                                <------------------------------------------------------------------rJMFF031L08**
                                                                                                                       --------------------------------------------------------------->JMSF033N23**
                                                                                                                                            <--------------------------------------------------------------------rJMFF008N20**
                                                                                                                       ---------------------------------------------------------------------------->JMSF043N04**
                                                                                                                      --------------------------------------------------------------->JMSF052J08**
                                                                                                                      -------------------------------------------------------------------->JMSF045H15**
                                                                                                                                   <----------------------------------------------------------------------------rJMSF041K21**
                                                                                                                          <-------------------------------------------------------------------------------------rJMSF038E23**
                                                                                                                                    <------------------------------------------------------------------------------rJMFF025F24**
                                                                                                                                                   <------------------------------------------------------------rJMSF033N23**
                                                                                                                       --------------------------------------------->JMFF013M10**
                                                                                                                                                <------------------------------------------------------------------------rJMSF008L08**
                                                                                                                       --------------------------------------------------------------->JMSF039O08**
                                                                                                                                         <------------------------------------------------------------------------------rJMSF052A14**
                                                                                                                      ----------------------------------------------------------------->JMSF033N19**
                                                                                                                       ------------------------->JMSF013K21**
                                                                                                                                    <----------------------------------------------------------------------------rJMSF017O12**
                                                                                                                      --------------------------------------------------------------->JMSF024I07**
                                                                                                                       ----------------------------------------------------------------->JMSF051M12**
                                                                                                                                                  <---------------------------------------------------------------rJMFF022B14**
                                                                                                                                       <-------------------------------------------------------------------------rJMSF026O13**
                                                                                                                       -------------------------------------------->JMSF013D16**
                                                                                                                       --------------------------------------------------------------->JMSF030P07**
                                                                                                                       ------------------------------------------------------>JMFF032A06**
                                                                                                                       -------------------------------------------------------------->JMSF022C13**
                                                                                                                       --------------------------------------------->JMSF018D15**
                                                                                                                                   <-----------------------------------------------------------------------------rJMSF048E05**
                                                                                                                                      <-------------------------------------------------------------------------rJMSF043N04**
                                                                                                                       ------------------------------------------------------->JMFF010E19**
                                                                                                                       --------------------------------------------------------------->JMSF026L18**
                                                                                                                       -------------------------------------------->JMSF015N09**
                                                                                                                       -------------------------------------------------------------->JMSF026O13**
                                                                                                                       -------------------------------------------->JMSF019G18**
                                                                                                                       --------------------------------------------------------------->JMSF049A19**
                                                                                                                      ---------------------------------------------->JMSF016I18**
                                                                                                                                         <-----------------------------------------------------------------------rJMFF010E19**