clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF011I09 | Sequence | 550 | 011900 (5) | ref|XP_010246834.1| | 2e-102 | PREDICTED: protein RRP45A-like isoform X2 [Nelumbo nucifera] | 715 | 001060 (4) | ref|XP_009610301.1| | 3e-08 | PREDICTED: protein RRP45A-like isoform X2 [Nicotiana tomentosiformis] |
JMFF031O20 | Sequence | 560 | 011900 (5) | ref|XP_010246834.1| | 3e-104 | PREDICTED: protein RRP45A-like isoform X2 [Nelumbo nucifera] | 714 | 001060 (4) | ref|XP_009610302.1| | 4e-08 | PREDICTED: protein RRP45A-like isoform X3 [Nicotiana tomentosiformis] |
JMFF034H19 | Sequence | 549 | 011900 (5) | ref|XP_010246834.1| | 2e-101 | PREDICTED: protein RRP45A-like isoform X2 [Nelumbo nucifera] | 691 | 001060 (4) | ref|XP_009610302.1| | 1e-07 | PREDICTED: protein RRP45A-like isoform X3 [Nicotiana tomentosiformis] |
JMFF040I22 | Sequence | 552 | 011900 (5) | ref|XP_010246834.1| | 4e-102 | PREDICTED: protein RRP45A-like isoform X2 [Nelumbo nucifera] | 719 | 001060 (4) | ref|XP_009610302.1| | 2e-08 | PREDICTED: protein RRP45A-like isoform X3 [Nicotiana tomentosiformis] |
JMSF005K24 | Sequence | 360 | 011900 (5) | ref|XP_008777152.1| | 2e-48 | PREDICTED: protein RRP45A-like [Phoenix dactylifera] ref|XP_008777153.1| PREDICT |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011900============================================ 553 ============================================Contig001060============================================ 729 3 -------------------------------------------------------------------------------------------------->JMFF011I09 <------------------------------------------------------------------------------------------------rJMFF011I09 14 ----------------------------------------------------------------------------------------------->JMFF031O20 <-----------------------------------------------------------------------------------------------rJMFF031O20 14 -------------------------------------------------------------------------------------------------->JMFF034H19 <----------------------------------------------------------------------------------------------rJMFF034H19 14 --------------------------------------------------------------------------------------------------->JMFF040I22 <-------------------------------------------------------------------------------------------------rJMFF040I22 ----------------------------------------------------------------->JMSF005K24-