List of clones in pair P000687.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001E13Sequence447012829 (27)emb|CDP11417.1|1e-60unnamed protein product [Coffea canephora]242003474 (8)
JMFF004E07Sequence162012829 (27)704003474 (8)ref|XP_011101270.1|8e-44PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum
JMFF007G16Sequence550012829 (27)
JMFF021J17Sequence527012829 (27)
JMFF041P23Sequence643012829 (27)emb|CDP11417.1|1e-76unnamed protein product [Coffea canephora]644003474 (8)ref|XP_011101270.1|2e-36PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum
JMFS007A08Sequence635012829 (27)ref|XP_004252570.1|9e-111PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Solanum
JMFS007C06Sequence623012829 (27)gb|ACZ64785.1|9e-105cellulose synthase [Populus ussuriensis]
JMFS015D01Sequence511012829 (27)emb|CDP11417.1|2e-77unnamed protein product [Coffea canephora]
JMFS057F03Sequence594012829 (27)emb|CDP11417.1|9e-96unnamed protein product [Coffea canephora]
JMFS062A10Sequence642012829 (27)gb|ACZ64785.1|1e-136cellulose synthase [Populus ussuriensis]
JMFS073C06Sequence616012829 (27)gb|KDO83763.1|1e-100hypothetical protein CISIN_1g001373mg [Citrus sinensis] gb|KDO83764.1| hypotheti
JMFS077F01Sequence654012829 (27)emb|CDP11417.1|2e-88unnamed protein product [Coffea canephora]
JMFS078A06Sequence626012829 (27)emb|CDP11417.1|2e-11unnamed protein product [Coffea canephora]
JMFS092G08Sequence623012829 (27)emb|CDP11417.1|3e-65unnamed protein product [Coffea canephora]
JMFS096H05Sequence626012829 (27)emb|CDP11417.1|2e-96unnamed protein product [Coffea canephora]
JMFS098C12Sequence627012829 (27)emb|CDP11417.1|2e-18unnamed protein product [Coffea canephora]
JMFS100C05Sequence601012829 (27)emb|CDP11417.1|1e-83unnamed protein product [Coffea canephora]
JMFS112G02Sequence620012829 (27)emb|CDP11417.1|1e-15unnamed protein product [Coffea canephora]
JMFS124B07Sequence562003474 (8)ref|XP_011101270.1|1e-40PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum
JMFS136A07Sequence602012829 (27)gb|ACZ64785.1|6e-117cellulose synthase [Populus ussuriensis]
JMFS136H09Sequence622003474 (8)ref|XP_011074751.1|6e-17PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum
JMFS147D09Sequence620012829 (27)emb|CDP11417.1|2e-77unnamed protein product [Coffea canephora]
JMFS164E05Sequence626012829 (27)emb|CDP11417.1|6e-57unnamed protein product [Coffea canephora]
JMFS165A05Sequence614012829 (27)emb|CDP11417.1|3e-96unnamed protein product [Coffea canephora]
JMSF022G13Sequence631012829 (27)gb|KCW57897.1|3e-140hypothetical protein EUGRSUZ_H006462, partial [Eucalyptus grandis]798003474 (8)ref|XP_011074751.1|3e-44PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum
JMSF046D10Sequence744012829 (27)ref|XP_002265955.1|4e-60PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming] [Vitis vinife707003474 (8)ref|XP_011101270.1|6e-43PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Sesamum

Contig 12829 BLAST Hits against nr-aa DB Show

Contig 3474 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig012829============================================2783         ============================================Contig003474============================================ 853
 245       -------------------------->JMSF046D10                                                                              <---------------------------------------------------------------------------------rJMSF046D10  
 479               ---------------------->JMFF041P23                                                                                  <-------------------------------------------------------------------------rJMFF041P23  
 489               ----->JMFF004E07                                                                                           <--------------------------------------------------------------------------------rJMFF004E07  
 527               --------------->JMFF001E13                                                                                                                                 <---------------------------rJMFF001E13  
1750                                                              ---------------------->JMSF022G13                   <--------------------------------------------------------------------------------------------rJMSF022G13  
                                                                                ------------------------>JMSF037B04#  
                                                  --------------------->JMFS007C06-                                   
       --------------------->JMFS112G02-                                                                              
                        ----------------->JMFS015D01-                                                                 
     ------------------->JMFF007G16-                                                                                  
                --------------------->JMFS092G08-                                                                     
                   ----------------->JMFF049M13*                                                                      
            --------------------->JMFS164E05-                                                                         
                                        --------------------->JMFS096H05-                                             
                                     --------------------->JMFS100C05-                                                
                             -------------------->JMFS057F03-                                                         
                                                             ---------------------->JMFS062A10-                       
                   ---------------------->JMFF050A17*                                                                 
                    --------------------->JMFS147D09-                                                                 
                    ---------------------->JMFS077F01-                                                                
     ------------------>JMFF021J17-                                                                                   
                                                       --------------------->JMFS136A07-                              
       ---------------------->JMFS098C12-                                                                             
                                           --------------------->JMFS165A05-                                          
                                                --------------------->JMFS073C06-                                     
      --------------------->JMFS078A06-                                                                               
                                                          ---------------------->JMFS007A08-                          
                                                                                                                                    ----------------------------------------------------------------->JMFS124B07-  
                                                                                                                                                 <------------------------------------------------------------------------JMFS136H09-  
                                                                                                                              <------------------------------------------------------------------------------------rJMFF012B07*