List of clones in pair P000440.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034F07Sequence569004906 (11)ref|XP_004241792.1|1e-81PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l748013756 (7)ref|XP_007011772.1|8e-92TRS120 isoform 1 [Theobroma cacao] gb|EOY29391.1| TRS120 isoform 1 [Theobroma ca
JMFS077G06Sequence627004906 (11)ref|XP_004241792.1|8e-95PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l
JMFS090C01Sequence620004906 (11)ref|XP_004241792.1|5e-102PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l
JMFS112D11Sequence622004906 (11)ref|XP_004241792.1|4e-94PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l
JMFS156A07Sequence626004906 (11)ref|XP_009618489.1|7e-103PREDICTED: trafficking protein particle complex subunit 9 isoform X2 [Nicotiana
JMSF001F12Sequence382004906 (11)ref|XP_009778819.1|3e-40PREDICTED: trafficking protein particle complex subunit 9 isoform X2 [Nicotiana706013756 (7)ref|XP_007011772.1|4e-90TRS120 isoform 1 [Theobroma cacao] gb|EOY29391.1| TRS120 isoform 1 [Theobroma ca
JMSF009D17Sequence594013756 (7)ref|XP_007011772.1|1e-61TRS120 isoform 1 [Theobroma cacao] gb|EOY29391.1| TRS120 isoform 1 [Theobroma ca
JMSF016I20Sequence496004906 (11)ref|XP_004241792.1|3e-50PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l710013756 (7)ref|XP_007011772.1|2e-88TRS120 isoform 1 [Theobroma cacao] gb|EOY29391.1| TRS120 isoform 1 [Theobroma ca
JMSF024A02Sequence606004906 (11)ref|XP_004241792.1|1e-85PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l670013756 (7)ref|XP_007011772.1|5e-81TRS120 isoform 1 [Theobroma cacao] gb|EOY29391.1| TRS120 isoform 1 [Theobroma ca
JMSF030M03Sequence654004906 (11)ref|XP_009618489.1|2e-105PREDICTED: trafficking protein particle complex subunit 9 isoform X2 [Nicotiana704013756 (7)ref|XP_007011772.1|2e-89TRS120 isoform 1 [Theobroma cacao] gb|EOY29391.1| TRS120 isoform 1 [Theobroma ca
JMSF042I19Sequence609004906 (11)ref|XP_004241792.1|1e-85PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l396013756 (7)ref|XP_010322725.1|3e-51PREDICTED: uncharacterized protein LOC101266526 isoform X2 [Solanum lycopersicu

Contig 4906 BLAST Hits against nr-aa DB Show

Contig 13756 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004906============================================ 701         ============================================Contig013756============================================ 748
  17   -------------------------------------------------------------------------------->JMFF034F07                    <---------------------------------------------------------------------------------------------------rJMFF034F07  
  36 ------------------------------------------------------>JMSF001F12                                                 <---------------------------------------------------------------------------------------------rJMSF001F12  
  42  ------------------------------------------------------------------------------------->JMSF024A02                      <----------------------------------------------------------------------------------------rJMSF024A02  
  54  --------------------------------------------------------------------->JMSF016I20                                 <--------------------------------------------------------------------------------------------rJMSF016I20  
  75       -------------------------------------------------------------------------------------------->JMSF030M03     <---------------------------------------------------------------------------------------------rJMSF030M03  
 183  ------------------------------------------------------------------------------------->JMSF042I19                                        <---------------------------------------------------rJMSF042I19  
             --------------------------------------------------------------------------------------->JMFS090C01-      
           --------------------------------------------------------------------------------------------->JMSF052I04*  
              ---------------------------------------------------------------------------------------->JMFS156A07-    
        ----------------------------------------------------------------------------------------->JMFS077G06-         
        ---------------------------------------------------------------------------------------->JMFS112D11-          
                                                                                                                             <------------------------------------------------------------------------------rJMSF009D17-