clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF008H15 | Sequence | 622 | 000032 (14) | ref|XP_009772632.1| | 4e-95 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri | 769 | 005348 (9) | ref|XP_009627036.1| | 8e-111 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana tomentosi |
JMFF012L24 | Sequence | 604 | 000032 (14) | ref|XP_009772632.1| | 2e-81 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri | 775 | 005348 (9) | ref|XP_009627036.1| | 2e-121 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana tomentosi |
JMFF024J20 | Sequence | 450 | 000032 (14) | ref|XP_009772632.1| | 3e-53 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri | 697 | 005348 (9) | ref|XP_009627036.1| | 1e-96 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana tomentosi |
JMFF031K17 | Sequence | 608 | 000032 (14) | ref|XP_009772632.1| | 6e-92 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri | 706 | 005348 (9) | ref|XP_009627036.1| | 2e-90 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana tomentosi |
JMFF031N16 | Sequence | 505 | 000032 (14) | ref|XP_009772632.1| | 1e-63 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri | 745 | 005348 (9) | ref|XP_009627036.1| | 4e-93 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana tomentosi |
JMFF032L17 | Sequence | 529 | 000032 (14) | ref|XP_009772632.1| | 1e-72 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri | 767 | 005348 (9) | ref|XP_009627036.1| | 7e-121 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana tomentosi |
JMFF036C05 | Sequence | 513 | 000032 (14) | ref|XP_009772632.1| | 1e-69 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri | |||||
JMFS051D09 | Sequence | 525 | 000032 (14) | ref|XP_009772632.1| | 5e-84 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri | |||||
JMSF003P12 | Sequence | 242 | 000032 (14) | ref|XP_009772632.1| | 4e-14 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri | 748 | 005348 (9) | ref|XP_009627036.1| | 8e-118 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana tomentosi |
JMSF032A07 | Sequence | 653 | 000032 (14) | ref|XP_009772632.1| | 2e-105 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri | 737 | 005348 (9) | ref|XP_009627036.1| | 9e-119 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana tomentosi |
JMSF041H21 | Sequence | 758 | 000032 (14) | ref|XP_009772632.1| | 2e-129 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri | 767 | 005348 (9) | ref|XP_009627036.1| | 4e-120 | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana tomentosi |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000032============================================ 764 ============================================Contig005348============================================ 790 2 --------------------------------------------------------------------------------->JMFF008H15 <-------------------------------------------------------------------------------------------------rJMFF008H15 4 ---------------------------------------------------------->JMFF024J20 <---------------------------------------------------------------------------------------rJMFF024J20 4 ------------------------------------------------------------------------------>JMFF012L24 <--------------------------------------------------------------------------------------------------rJMFF012L24 13 ------------------------------------------------------------------------------->JMFF031K17 <------------------------------------------------------------------------------------------rJMFF031K17 17 -------------------------------------------------------------------->JMFF032L17 <--------------------------------------------------------------------------------------------------rJMFF032L17 27 -------------------------------------------------------------------------------------------------->JMSF041H21 <------------------------------------------------------------------------------------------------rJMSF041H21 28 ----------------------------------------------------------------->JMFF031N16 <-----------------------------------------------------------------------------------------------rJMFF031N16 48 ------------------------------>JMSF003P12 <--------------------------------------------------------------------------------------------rJMSF003P12 59 ------------------------------------------------------------------------------------>JMSF032A07 <--------------------------------------------------------------------------------------------rJMSF032A07 ------------------------------------------------------------------------------------->JMFF042I09* ------------------------------------------------------------------>JMFF036C05- ------------------------------------------------------------------------------------->JMFF041L10* -------------------------------------------------------------------->JMFS051D09- ------------------------------------------------------------------>JMFF012K04*