| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF008F23 | Sequence | 615 | 007440 (23) | gb|ACF17656.1| | 3e-125 | putative glutamine synthase 2 [Capsicum annuum] | 776 | 013630 (24) | gb|AAB61302.1| | 3e-91 | chloroplastic glutamine synthetase [Helianthus annuus] |
| JMFF012N07 | Sequence | 510 | 007440 (23) | gb|ACF17656.1| | 8e-83 | putative glutamine synthase 2 [Capsicum annuum] | 776 | 013630 (24) | ref|XP_010450398.1| | 3e-101 | PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like [Camelina sat |
| JMFF018J02 | Sequence | 487 | 007440 (23) | gb|ACF17656.1| | 4e-68 | putative glutamine synthase 2 [Capsicum annuum] | |||||
| JMFF038E22 | Sequence | 592 | 007440 (23) | gb|ACF17656.1| | 5e-55 | putative glutamine synthase 2 [Capsicum annuum] | 732 | 013630 (24) | gb|AAB61302.1| | 5e-97 | chloroplastic glutamine synthetase [Helianthus annuus] |
| JMFN019O21 | Sequence | 623 | 013630 (24) | ref|XP_011090823.1| | 1e-120 | PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r | |||||
| JMSF001J09 | Sequence | 476 | 007440 (23) | gb|ACF17656.1| | 3e-75 | putative glutamine synthase 2 [Capsicum annuum] | 763 | 013630 (24) | ref|XP_010450398.1| | 3e-99 | PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like [Camelina sat |
| JMSF004P17 | Sequence | 254 | 007440 (23) | ref|XP_009629915.1| | 6e-20 | PREDICTED: glutamine synthetase, chloroplastic [Nicotiana tomentosiformis] gb|AA | 231 | 013630 (24) | |||
| JMSF008D06 | Sequence | 326 | 007440 (23) | ref|NP_001275177.1| | 1e-30 | glutamine synthetase, chloroplastic-like [Solanum tuberosum] gb|AAG40236.2| plas | 774 | 013630 (24) | ref|XP_011090823.1| | 3e-102 | PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r |
| JMSF014B04 | Sequence | 275 | 007440 (23) | 801 | 013630 (24) | ref|NP_001284439.1| | 3e-62 | glutamine synthetase leaf isozyme, chloroplastic [Cucumis melo] gb|AAX35343.1| g | |||
| JMSF014L01 | Sequence | 493 | 007440 (23) | gb|ACF17656.1| | 5e-68 | putative glutamine synthase 2 [Capsicum annuum] | 805 | 013630 (24) | ref|XP_011090823.1| | 3e-121 | PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r |
| JMSF016A18 | Sequence | 231 | 007440 (23) | ref|NP_001275177.1| | 2e-15 | glutamine synthetase, chloroplastic-like [Solanum tuberosum] gb|AAG40236.2| plas | 785 | 013630 (24) | ref|XP_011090823.1| | 5e-126 | PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r |
| JMSF017E13 | Sequence | 586 | 007440 (23) | gb|ACF17656.1| | 2e-101 | putative glutamine synthase 2 [Capsicum annuum] | 762 | 013630 (24) | gb|AAB61302.1| | 5e-98 | chloroplastic glutamine synthetase [Helianthus annuus] |
| JMSF021C23 | Sequence | 644 | 007440 (23) | gb|ACF17656.1| | 1e-116 | putative glutamine synthase 2 [Capsicum annuum] | 744 | 013630 (24) | gb|AAB61302.1| | 4e-98 | chloroplastic glutamine synthetase [Helianthus annuus] |
| JMSF022O23 | Sequence | 689 | 007440 (23) | gb|ACF17656.1| | 5e-127 | putative glutamine synthase 2 [Capsicum annuum] | 749 | 013630 (24) | ref|XP_010450398.1| | 2e-99 | PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like [Camelina sat |
| JMSF024A19 | Sequence | 665 | 007440 (23) | gb|ACF17656.1| | 3e-119 | putative glutamine synthase 2 [Capsicum annuum] | 740 | 013630 (24) | gb|AAB61302.1| | 5e-95 | chloroplastic glutamine synthetase [Helianthus annuus] |
| JMSF032E05 | Sequence | 717 | 007440 (23) | gb|ACF17656.1| | 2e-123 | putative glutamine synthase 2 [Capsicum annuum] | 721 | 013630 (24) | gb|AAB61302.1| | 7e-94 | chloroplastic glutamine synthetase [Helianthus annuus] |
| JMSF032G17 | Sequence | 693 | 007440 (23) | gb|ACF17656.1| | 1e-127 | putative glutamine synthase 2 [Capsicum annuum] | 753 | 013630 (24) | gb|AAB61302.1| | 2e-91 | chloroplastic glutamine synthetase [Helianthus annuus] |
| JMSF034J03 | Sequence | 671 | 007440 (23) | gb|ACF17656.1| | 5e-123 | putative glutamine synthase 2 [Capsicum annuum] | 738 | 013630 (24) | gb|AAB61302.1| | 3e-94 | chloroplastic glutamine synthetase [Helianthus annuus] |
| JMSF036J10 | Sequence | 715 | 013630 (24) | ref|XP_011090823.1| | 1e-101 | PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r | |||||
| JMSF041L18 | Sequence | 748 | 007440 (23) | gb|ACF17656.1| | 1e-126 | putative glutamine synthase 2 [Capsicum annuum] | 756 | 013630 (24) | ref|XP_010450398.1| | 3e-100 | PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like [Camelina sat |
| JMSF042M18 | Sequence | 754 | 007440 (23) | gb|ACF17656.1| | 2e-133 | putative glutamine synthase 2 [Capsicum annuum] | 757 | 013630 (24) | gb|AAB61302.1| | 4e-92 | chloroplastic glutamine synthetase [Helianthus annuus] |
| JMSF048H13 | Sequence | 707 | 007440 (23) | gb|ACF17656.1| | 7e-131 | putative glutamine synthase 2 [Capsicum annuum] | 769 | 013630 (24) | ref|XP_010450398.1| | 7e-103 | PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like [Camelina sat |
| JMSF049J17 | Sequence | 684 | 007440 (23) | gb|ACF17656.1| | 6e-125 | putative glutamine synthase 2 [Capsicum annuum] | 785 | 013630 (24) | gb|AAB61302.1| | 5e-98 | chloroplastic glutamine synthetase [Helianthus annuus] |
| JMSF050M11 | Sequence | 700 | 007440 (23) | gb|ACF17656.1| | 4e-124 | putative glutamine synthase 2 [Capsicum annuum] | 786 | 013630 (24) | gb|AAB61302.1| | 1e-98 | chloroplastic glutamine synthetase [Helianthus annuus] |
| JMSF050M18 | Sequence | 670 | 007440 (23) | gb|ACF17656.1| | 5e-123 | putative glutamine synthase 2 [Capsicum annuum] | 784 | 013630 (24) | ref|XP_011090823.1| | 2e-128 | PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig007440============================================ 927 ============================================Contig013630============================================ 880 33 --------------------------------------------------------------->JMFF038E22 <----------------------------------------------------------------------------------rJMFF038E22 77 ----------------------------->JMSF014B04 <-----------------------------------------------------------------rJMSF014B04 150 --------------------------------------------------------------------------------->JMSF042M18 <-----------------------------------------------------------------------------------rJMSF042M18 166 -------------------------------------------------------------------------->JMSF050M11 <----------------------------------------------------------------------------------------rJMSF050M11 173 ---------------------------------->JMSF008D06 <---------------------------------------------------------------------------------------rJMSF008D06 185 -------------------------------------------------------------->JMSF017E13 <-------------------------------------------------------------------------------------rJMSF017E13 185 ------------------------------------------------------------------------->JMSF049J17 <-------------------------------------------------------------------------------------rJMSF049J17 190 ------------------------------------------------------>JMFF012N07 <---------------------------------------------------------------------------------------rJMFF012N07 194 -------------------------------------------------------------------------->JMSF032G17 <-------------------------------------------------------------------------------------rJMSF032G17 200 --------------------------------------------------->JMSF001J09 <-------------------------------------------------------------------------------------rJMSF001J09 201 ------------------------------------------------------------------------------->JMSF041L18 <-------------------------------------------------------------------------------------rJMSF041L18 206 -------------------------------------------------------------------->JMSF021C23 <------------------------------------------------------------------------------------rJMSF021C23 206 ----------------------------------------------------->JMSF014L01 <-----------------------------------------------------------------------------------------rJMSF014L01 208 ---------------------------------------------------------------------->JMSF024A19 <-----------------------------------------------------------------------------------rJMSF024A19 211 -------------------------->JMSF004P17 <-----------------------rJMSF004P17 211 ----------------------------------------------------------------------->JMSF034J03 <----------------------------------------------------------------------------------rJMSF034J03 211 ------------------------------------------------------------------------->JMSF022O23 <-----------------------------------------------------------------------------------rJMSF022O23 225 ---------------------------------------------------------------------------->JMSF032E05 <--------------------------------------------------------------------------------rJMSF032E05 235 --------------------------------------------------------------------------->JMSF048H13 <--------------------------------------------------------------------------------------rJMSF048H13 248 ----------------------------------------------------------------->JMFF008F23 <---------------------------------------------------------------------------------------rJMFF008F23 276 ----------------------------------------------------------------------->JMSF050M18 <----------------------------------------------------------------------------------------rJMSF050M18 284 ------------------------>JMSF016A18 <---------------------------------------------------------------------------------------rJMSF016A18 --------------------------------------------------->JMFF018J02- <--------------------------------------------------------------------------------rJMSF036J10- ---------------------------------------------------------------------->JMFN019O21-