List of clones in pair P000004.

clone	seq.	5'-sequence					3'-sequence
clone	seq.	length	contig	BestHit	Evalue	description	length	contig	BestHit	Evalue	description
JMFF003C05	Sequence	160	010636 (44)	gb\|AFD62807.1\|	69.3	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF005M20	Sequence	460	010636 (44)	gb\|AFD62807.1\|	181	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	702	011161 (36)	gb\|ABU43075.1\|	2e-110	3-deoxy-arabino heptulosonate 7-phosphate synthase [Gossypium hirsutum]
JMFF008N18	Sequence	538	010636 (44)	gb\|AFD62807.1\|	236	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	772	011161 (36)	gb\|AFD62807.1\|	385	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF008P04	Sequence	512	010636 (44)	gb\|AFD62807.1\|	216	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	775	011161 (36)	gb\|AFD62807.1\|	389	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF009K03	Sequence	509	010636 (44)	gb\|AFD62807.1\|	213	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	771	011161 (36)	gb\|AFD62807.1\|	344	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF010K23	Sequence	337	010636 (44)	gb\|AFD62807.1\|	134	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	226	011161 (36)	gb\|KJB59000.1\|	5e-29	hypothetical protein B456_009G235000 [Gossypium raimondii]
JMFF014H11	Sequence	507	010636 (44)	gb\|AFD62807.1\|	213	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	752	011161 (36)	gb\|AFD62807.1\|	375	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF017C07	Sequence	527	010636 (44)	gb\|AFD62807.1\|	228	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	708	011161 (36)	gb\|AFD62807.1\|	342	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF018D10	Sequence	152	010636 (44)	gb\|AFD62807.1\|	58.9	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF021F24	Sequence	510	010636 (44)	gb\|AFD62807.1\|	216	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	698	011161 (36)	gb\|AFD62807.1\|	365	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF022O24	Sequence	464	010636 (44)	gb\|AFD62807.1\|	182	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	780	011161 (36)	gb\|AFD62807.1\|	395	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF023C23	Sequence	464	010636 (44)	gb\|AFD62807.1\|	182	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	774	011161 (36)	gb\|AFD62807.1\|	383	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF023I14	Sequence	439	010636 (44)	gb\|AFD62807.1\|	128	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF029F16	Sequence	528	010636 (44)	gb\|AFD62807.1\|	230	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	762	011161 (36)	gb\|AFD62807.1\|	382	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF030C14	Sequence						695	011161 (36)	gb\|ABU43075.1\|	5e-109	3-deoxy-arabino heptulosonate 7-phosphate synthase [Gossypium hirsutum]
JMFF031E23	Sequence	511	010636 (44)	gb\|AFD62807.1\|	216	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	782	011161 (36)	gb\|AFD62807.1\|	395	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF031P15	Sequence	510	010636 (44)	gb\|AFD62807.1\|	216	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	753	011161 (36)	gb\|AFD62807.1\|	389	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF032B24	Sequence	521	010636 (44)	gb\|AFD62807.1\|	222	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	780	011161 (36)	gb\|AFD62807.1\|	395	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF033A20	Sequence	528	010636 (44)	gb\|AFD62807.1\|	228	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	721	011161 (36)	gb\|AFD62807.1\|	340	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF036C01	Sequence	508	010636 (44)	gb\|AFD62807.1\|	213	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	761	011161 (36)	gb\|AFD62807.1\|	367	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF036L16	Sequence	438	010636 (44)	gb\|AFD62807.1\|	167	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF040P22	Sequence	527	010636 (44)	gb\|AFD62807.1\|	228	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	791	011161 (36)	gb\|AFD62807.1\|	404	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFF043E02	Sequence	629	010636 (44)	gb\|AFD62807.1\|	297	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	326	011161 (36)
JMFF045B02	Sequence	606	010636 (44)	gb\|AFD62807.1\|	288	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	449	011161 (36)	gb\|KJB59003.1\|	3e-39	hypothetical protein B456_009G235000 [Gossypium raimondii]
JMFF047A09	Sequence	504	010636 (44)	gb\|AFD62807.1\|	211	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	366	011161 (36)	gb\|KJB59000.1\|	4e-31	hypothetical protein B456_009G235000 [Gossypium raimondii]
JMFF047O04	Sequence	463	010636 (44)	gb\|AFD62807.1\|	182	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	286	011161 (36)
JMFF051J19	Sequence	611	010636 (44)	gb\|AFD62807.1\|	265	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	460	011161 (36)	gb\|EYU36486.1\|	1e-38	hypothetical protein MIMGU_mgv1a0227502mg, partial [Erythranthe guttata]
JMFS016E04	Sequence	580	010636 (44)	gb\|AFD62807.1\|	288	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFS042G09	Sequence	626	010636 (44)	gb\|AFD62807.1\|	431	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFS043E01	Sequence	627	010636 (44)	gb\|AFD62807.1\|	434	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFS049H06	Sequence	616	010636 (44)	gb\|AFD62807.1\|	301	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMFS093H11	Sequence	627	010636 (44)	gb\|AFD62807.1\|	318	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF001I19	Sequence	243	010636 (44)	gb\|AFD62807.1\|	99.0	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	737	011161 (36)	gb\|AFD62807.1\|	388	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF003C12	Sequence	306	010636 (44)	gb\|AFD62807.1\|	96.7	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	743	011161 (36)	gb\|AFD62807.1\|	388	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF003H09	Sequence	386	010636 (44)	gb\|AFD62807.1\|	132	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	757	011161 (36)	gb\|AFD62807.1\|	303	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF003I05	Sequence	316	010636 (44)	gb\|AFD62807.1\|	96.7	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	742	011161 (36)	gb\|AFD62807.1\|	384	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF013B16	Sequence	359	010636 (44)	gb\|AFD62807.1\|	96.7	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	758	011161 (36)	gb\|AFD62807.1\|	397	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF015G03	Sequence	264	010636 (44)	gb\|AFD62807.1\|	109	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	741	011161 (36)	gb\|AFD62807.1\|	389	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF016O06	Sequence	465	010636 (44)	gb\|AFD62807.1\|	182	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	745	011161 (36)	gb\|AFD62807.1\|	393	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF040D17	Sequence	658	010636 (44)	gb\|AFD62807.1\|	320	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	491	011161 (36)	gb\|AFD62807.1\|	176	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF044D23	Sequence	680	010636 (44)	gb\|AFD62807.1\|	337	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	745	011161 (36)	gb\|AFD62807.1\|	388	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF048P19	Sequence	659	010636 (44)	gb\|AFD62807.1\|	320	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	743	011161 (36)	gb\|AFD62807.1\|	388	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF048P24	Sequence	660	010636 (44)	gb\|AFD62807.1\|	320	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	692	011161 (36)	gb\|AFD62807.1\|	351	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF049E11	Sequence	659	010636 (44)	gb\|AFD62807.1\|	320	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	710	011161 (36)	gb\|AFD62807.1\|	393	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]
JMSF050C01	Sequence	660	010636 (44)	gb\|AFD62807.1\|	320	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]	744	011161 (36)	gb\|AFD62807.1\|	387	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Ipomoea purpurea]

Contig 10636 BLAST Hits against nr-aa DB Show

Contig 11161 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.

SCORE============================================Contig010636============================================ 952         ============================================Contig011161============================================ 853
  46      ----------------------------------------------------------------->JMFF043E02                                                                                              <-------------------------------------rJMFF043E02  
  94      ------------------------------------------------>JMFF047O04                                                                                                             <---------------------------------rJMFF047O04  
  94      --------------------------------------------------------------->JMFF051J19                                                                             <--------------------------------------------------rJMFF051J19  
  96 ------------------------------------->JMSF013B16                                                                 <----------------------------------------------------------------------------------------rJMSF013B16  
 100 --------------------------->JMSF015G03                                                                            <--------------------------------------------------------------------------------------rJMSF015G03  
 101      --------------------------------------------------------------->JMFF045B02                                                                           <----------------------------------------------------rJMFF045B02  
 106     ----------------------------------------------------->JMFF009K03                                              <------------------------------------------------------------------------------------------rJMFF009K03  
 107      ----------------------------------------------------->JMFF031E23                                             <-------------------------------------------------------------------------------------------rJMFF031E23  
 107      ------------------------------------------------------->JMFF017C07                                                    <----------------------------------------------------------------------------------rJMFF017C07  
 108      ------------------------------------------------>JMFF022O24                                                 <-------------------------------------------------------------------------------------------rJMFF022O24  
 108      ----------------------------------------------------->JMFF008P04                                             <------------------------------------------------------------------------------------------rJMFF008P04  
 108      ------------------------------------------------------->JMFF029F16                                            <-----------------------------------------------------------------------------------------rJMFF029F16  
 108     ------------------------------------------------------->JMFF033A20                                                    <----------------------------------------------------------------------------------rJMFF033A20  
 109      ------------------------------------------------>JMFF005M20                                                          <----------------------------------------------------------------------------------rJMFF005M20  
 109      ---------------------------------------------------->JMFF014H11                                                <----------------------------------------------------------------------------------------rJMFF014H11  
 109      ------------------------------------------------------->JMFF040P22                                           <------------------------------------------------------------------------------------------rJMFF040P22  
 109      -------------------------------------------------------->JMFF008N18                                          <------------------------------------------------------------------------------------------rJMFF008N18  
 110      ------------------------------------------------>JMFF023C23                                                  <------------------------------------------------------------------------------------------rJMFF023C23  
 110      ----------------------------------------------------->JMFF036C01                                                 <--------------------------------------------------------------------------------------rJMFF036C01  
 111      ------------------------------------------------------>JMFF032B24                                           <-------------------------------------------------------------------------------------------rJMFF032B24  
 129      ----------------------------------------------------->JMFF031P15                                             <----------------------------------------------------------------------------------------rJMFF031P15  
 133      ---------------------------------------------------->JMFF047A09                                                                                            <------------------------------------------rJMFF047A09  
 135      -------------------------------------------------------------------->JMSF048P19                              <---------------------------------------------------------------------------------------rJMSF048P19  
 135      --------------------------------------------------------------------->JMSF048P24                                    <--------------------------------------------------------------------------------rJMSF048P24  
 137      -------------------------------->JMSF003I05                                                                   <--------------------------------------------------------------------------------------rJMSF003I05  
 138      ------------------------------->JMSF003C12                                                                   <---------------------------------------------------------------------------------------rJMSF003C12  
 139      --------------------------------------------------------------------->JMSF050C01                             <---------------------------------------------------------------------------------------rJMSF050C01  
 140      ------------------------------------------------>JMSF016O06                                                  <---------------------------------------------------------------------------------------rJMSF016O06  
 140      ----------------------------------------------------------------------->JMSF044D23                           <---------------------------------------------------------------------------------------rJMSF044D23  
 142      ------------------------->JMSF001I19                                                                         <--------------------------------------------------------------------------------------rJMSF001I19  
 146      ---------------------------------------->JMSF003H09                                                           <-------------------------------------------------------------------------------------rJMSF003H09  
 163      ----------------------------------------------------->JMFF021F24                                                 <--------------------------------------------------------------------------------rJMFF021F24  
 175      -------------------------------------------------------------------->JMSF049E11                              <-----------------------------------------------------------------------------------rJMSF049E11  
 184      -------------------------------------------------------------------->JMSF040D17                                                           <----------------------------------------------------rJMSF040D17  
 582                        ----------------------------------->JMFF010K23                                                                             <-----------------------rJMFF010K23  
                                       ----------------------------------------------------------------->JMFS043E01-  
          --------------------------------------------->JMFF036L16-                                                   
           ---------------------------------------------------------------->JMFS049H06-                               
             ------------------------------------------------------------>JMFS016E04-                                 
          ---------------->JMFF003C05-                                                                                
             ----------------------------------------------------------------->JMFS093H11-                            
                                       ----------------------------------------------------------------->JMFS042G09-  
          --------------->JMFF018D10-                                                                                 
          --------------------------------------------->JMFF023I14-                                                   
                                                                                                                                <---------------------------------------------------------------------------------rJMFF030C14-