Contig 014143:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP007G03Sequence626014143 (3)ref|XP_006366088.1|129PREDICTED: uncharacterized protein LOC102596532 [Solanum tuberosum]
JMCP015A04Sequence593014143 (3)ref|XP_006366088.1|130PREDICTED: uncharacterized protein LOC102596532 [Solanum tuberosum]
JMCP015A08Sequence611014143 (3)ref|XP_006366088.1|130PREDICTED: uncharacterized protein LOC102596532 [Solanum tuberosum]

Alignment

This contig is upended


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rJMCP015A08+                                             TAGACAAAATTtaacagGAAGTGTA
rJMCP015A04+                                                               AAGTGTA
rJMCP007G03+                                            ATAGACAAAATTAaaGTCGAAGTGTA
                      ____________________________________________________________
consensus                                               ATAGACAAAATTATTGTCGAAGTGTA
 
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rJMCP015A08+          ACAAGCAATTATAACACTAACCGAATTATATTTTAAGCACTAAAAATGAAAATAGAAAAC
rJMCP015A04+          ACAAGCttaatatACAgTttggcttTTATATTTTAAGCACTAAAAATGAAAATAGAAAAC
rJMCP007G03+          ACAAGCAATTATAACACTAACCGAATTATATTTTAAGCACTAAAAATGAAAATAGAAAAC
                      ____________________________________________________________
consensus             ACAAGCAATTATAACACTAACCGAATTATATTTTAAGCACTAAAAATGAAAATAGAAAAC
 
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rJMCP015A08+          TATGGCCTTAGTTTAATCTACACAAGTCTGCTATCAAGGTTTGGTACTAAACATCGTGAA
rJMCP015A04+          TATGGCCTTAGTTTAATCTACACAAGTCTGCTATCAAGGTTTGGTACTAAACATCGTGAA
rJMCP007G03+          TATGGCCTTAGTTTAATCTACACAAGTCTGCTATCAAGGTTTGGTACTAAACATCGTGAA
                      ____________________________________________________________
consensus             TATGGCCTTAGTTTAATCTACACAAGTCTGCTATCAAGGTTTGGTACTAAACATCGTGAA
 
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rJMCP015A08+          GAGCATAGAAGATTCTGTGCAAATCAGTTGCCACAGATGAAGTTTAATCAACCCATGCAA
rJMCP015A04+          GAGCATAGAAGATTCTGTGCAAATCAGTTGCCACAGATGAAGTTTAATCAACCCATGCAA
rJMCP007G03+          GAGCATAGAAGATTCTGTGCAAATCAGTTGCCACAGATGAAGTTTAATCAACCCATGCAA
                      ____________________________________________________________
consensus             GAGCATAGAAGATTCTGTGCAAATCAGTTGCCACAGATGAAGTTTAATCAACCCATGCAA
 
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rJMCP015A08+          ATAATAATGTCAAGAACAAGCACATTCTATCCAAGGCAGCTTGGTAGATGTAAAGATGAC
rJMCP015A04+          ATAATAATGTCAAGAACAAGCACATTCTATCCAAGGCAGCTTGGTAGATGTAAAGATGAC
rJMCP007G03+          ATAATAATGTCAAGAACAAGCACATTCTATCCAAGGCAGCTTGGTAGATGTAAAGATGAC
                      ____________________________________________________________
consensus             ATAATAATGTCAAGAACAAGCACATTCTATCCAAGGCAGCTTGGTAGATGTAAAGATGAC
 
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rJMCP015A08+          CTCAAAGCATTGTGCTACTTTTTCTTCTCATCTGCTAACCTTGTTTGCTTGTGGATTGTG
rJMCP015A04+          CTCAAAGCATTGTGCTACTTTTTCTTCTCATCTGCTAACCTTGTTTGCTTGTGGATTGTG
rJMCP007G03+          CTCAAAGCATTGTGCTACTTTTTCTTCTCATCTGCTAACCTTGTTTGCTTGTGGATTGTG
                      ____________________________________________________________
consensus             CTCAAAGCATTGTGCTACTTTTTCTTCTCATCTGCTAACCTTGTTTGCTTGTGGATTGTG
 
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rJMCP015A08+          ATGCATCAGTTTCTCCAGCACCAGCATGTGTAGTTCCAGAGGGAGGAGCTTCAGAACAGG
rJMCP015A04+          ATGCATCAGTTTCTCCAGCACCAGCATGTGTAGTTCCAGAGGGAGGAGCTTCAGAACAGG
rJMCP007G03+          ATGCATCAGTTTCTCCAGCACCAGCATGTGTAGTTCCAGAGGGAGGAGCTTCAGAACAGG
                      ____________________________________________________________
consensus             ATGCATCAGTTTCTCCAGCACCAGCATGTGTAGTTCCAGAGGGAGGAGCTTCAGAACAGG
 
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rJMCP015A08+          CTCTGAGGACAGCTTCATTCTGCCAAACACGACGGAGGCGCTTCTTGGCGTTGGCCTTGC
rJMCP015A04+          CTCTGAGGACAGCTTCATTCTGCCAAACACGACGGAGGCGCTTCTTGGgcaaccggaacg
rJMCP007G03+          CTCTGAGGACAGCTTCATTCTGCCAAACACGACGGAGGCGCTTCTTGGCGTTGGCCTTGC
                      ____________________________________________________________
consensus             CTCTGAGGACAGCTTCATTCTGCCAAACACGACGGAGGCGCTTCTTGGCGTTGGCCTTGC
 
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rJMCP015A08+          GAGTGGTGGTGAGCTTTATTCGCTTCCAAACGAGGCCGCCGGAATCGTGCTTCTTCACTA
rJMCP015A04+          cAGTGGTGGTGAGCTTTATTCGCTTCCAAACGAGGCCGCCGGAATCGTGCTTCTTCACTA
rJMCP007G03+          GAGTGGTGGTGAGCTTTATTCGCTTCCAAACGAGGCCGCCGGAATCGTGCTTCTTCACTA
                      ____________________________________________________________
consensus             GAGTGGTGGTGAGCTTTATTCGCTTCCAAACGAGGCCGCCGGAATCGTGCTTCTTCACTA
 
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rJMCP015A08+          TTTCCATCACCCTGGTCCCCCAGAATGCCCCCCACGCCGATGCCATTCTCTCTTTGTCCG
rJMCP015A04+          TTTCCATCACCCTGGTCCCCCAGAATGCCCCCCACGCCGATGCCATTCTCTCTTTGTCCG
rJMCP007G03+          TTTCCATCACCCTGGTCCCCCAGAATGCCCCCCACGCCGATGCCATTCTCTCTTTGTCCG
                      ____________________________________________________________
consensus             TTTCCATCACCCTGGTCCCCCAGAATGCCCCCCACGCCGATGCCATTCTCTCTTTGTCCG
 
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rJMCP015A08+          GCGAATGCGTCGCAGTCGAAATTGTATAGGAGATGGTAGGAGGCGA              
rJMCP015A04+          GCGAATGCGTCGCAGTCGAAATTGTATAGGAGATGGTAGGAGGCGA              
rJMCP007G03+          GCGAATGCGTCGCAGTCGAAATTGTATAGGAGATGGTAGGAGGCGACCGGCGAGATGGAG
                      ____________________________________________________________
consensus             GCGAATGCGTCGCAGTCGAAATTGTATAGGAGATGGTAGGAGGCGACCGGCGAGATGGAG