Contig 014141:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP003H08Sequence609014141 (5)ref|XP_009602392.1|7e-54PREDICTED: uncharacterized protein LOC104097528 isoform X1 [Nicotiana tomentosi217011725 (10)
JMCP005F12Sequence604014141 (5)ref|XP_010318487.1|191PREDICTED: uncharacterized protein LOC101258446 [Solanum lycopersicum]
JMCP006A04Sequence616014141 (5)ref|XP_010318487.1|194PREDICTED: uncharacterized protein LOC101258446 [Solanum lycopersicum]
JMCP008G11Sequence607014141 (5)ref|XP_010318487.1|193PREDICTED: uncharacterized protein LOC101258446 [Solanum lycopersicum]
JMCP010E11Sequence613014141 (5)ref|XP_010318487.1|196PREDICTED: uncharacterized protein LOC101258446 [Solanum lycopersicum]

Alignment

This contig is upended


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JMCP010E11+                                                 CTCAGATGCATTTAGTGAGAAT
rJMCP008G11+                                                      TGCATTTAGTGAGAAT
JMCP003H08+                                                       TGCATTTAGTGAGAAT
rJMCP005F12+                                                         ATTTAGTGAGAAT
rJMCP006A04+                                                      TGCATTTAGTGAGAAT
                      ____________________________________________________________
consensus                                                   CTCAGATGCATTTAGTGAGAAT
 
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JMCP010E11+           AATTTATTGGCTTCCAAAGCTGGGGCTAGCTGGAAGCCTGATTTTTCTAAGTTGAAGGGG
rJMCP008G11+          AATTTATTGGCTTCCAAAGCTGGGGCTAGCTGGAAGCCTGATTTTTCTAAGTTGAAGGGG
JMCP003H08+           AATTTATTGGCTTCCAAAGCTGGGGCTAGCTGGAAGggacATTTTTCTAAGTTGAAGGGG
rJMCP005F12+          AATTTAaaccgaagCAAAcgacGGGCTAGgaccttcggactTTaTagaAAGTTGAAGGGG
rJMCP006A04+          AATTTATTGGCTTCCAAAGCTGGGGCTAGCTGGAAGCCTGATTTTTCTAAGTTGAAGGGG
                      ____________________________________________________________
consensus             AATTTATTGGCTTCCAAAGCTGGGGCTAGCTGGAAGCCTGATTTTTCTAAGTTGAAGGGG
 
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JMCP010E11+           GAAATATGTTTGGAGAATTTAACAGTAAAAGAACTTCATGAAACTTTTAAAGCAACCTTT
rJMCP008G11+          GAAATATGTTTGGAGAATTTAACAGTAAAAGAACTTCATGAAACTTTTAAAGCAACCTTT
JMCP003H08+           GAAATATGTTTGGAGAATTTAACAGTAAAAGAACTTCATGAAACTTTTAAAGCAACCTTT
rJMCP005F12+          GAAATATGaaacctGAATTTttgAGTAAAAGAACTTCATGAAACTTTTAAAGCAACCTTT
rJMCP006A04+          GAAATATGTTTGGAGAATTTAACAGTAAAAGAACTTCATGAAACTTTTAAAGCAACCTTT
                      ____________________________________________________________
consensus             GAAATATGTTTGGAGAATTTAACAGTAAAAGAACTTCATGAAACTTTTAAAGCAACCTTT
 
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JMCP010E11+           GGAAGAGATACTTCAGTTAAGGACAAGCAATGGCTTAAGAGGAGGATTTCCATGGGGTTG
rJMCP008G11+          GGAAGAGATACTTCAGTTAAGGACAAGCAATGGCTTAAGAGGAGGGTTTCCATGGGGTTG
JMCP003H08+           GGAAGAGATACTTCAGTTAAGGACAAGCAATGGCTTAAGAGGAGGATTTCCATGGGGTTG
rJMCP005F12+          GGAAGAGATACTTCAGTTAAGGACAAGCAATGGCTTAAGAGGAGGATTTCCATGGGGTTG
rJMCP006A04+          GGAAGAGATACTTCAGTTAAGGACAAGCAtTGGCTTAAGAGGAGGATTTCCATGGGGTTG
                      ____________________________________________________________
consensus             GGAAGAGATACTTCAGTTAAGGACAAGCAATGGCTTAAGAGGAGGATTTCCATGGGGTTG
 
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JMCP010E11+           TCAAATTCATGTGATTTTTCTTGTACTAGTTTTGTTATTGAGGACAGCAGAGTGGTGAAG
rJMCP008G11+          TCAAATTCATGTGATTTTTCTTGTACTAGTTTTGTTATTGAGGACAGCAGAGTGGTGAAG
JMCP003H08+           TCAAATTCATGTGATTTTTCTTGTACTAGTTTTGTTATTGAGGACAGCAGAGTGGTGAAG
rJMCP005F12+          TCAAATTCATGTGATTTTTCTTGTACTAGTTTTGTTATTGAGGACAGCAGAGTGGTGAAG
rJMCP006A04+          TCAAATTCATGTGATTTTTCTTGTACTAGTTTTGTTATTGAGGACAGCAGAGTGGTGAAG
                      ____________________________________________________________
consensus             TCAAATTCATGTGATTTTTCTTGTACTAGTTTTGTTATTGAGGACAGCAGAGTGGTGAAG
 
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JMCP010E11+           AAAGTTAAAGAAAACATTGCAAGTGTGAATGGTTCGATTTCAAAAGATCCCATAGTTGCA
rJMCP008G11+          AAAGTTAAAGAAAACATTGCAAGTGTGAATGGTTCGATTTCAAAAGATCCCATAGTTGCA
JMCP003H08+           AAAGTTAAAGAAAACATTGCAAGTGTGAATGGTTCGATTTCAAAAGATCCCATAGTTGCA
rJMCP005F12+          GAAGTTAAAGAAAACATTGCAAGTGTGAATGGTTCGATTTCAAAAGATCCCATAGTTGCA
rJMCP006A04+          AAAGTTAAAGAAAACATTGCAAGTGTGAATGGTTCGATTTCAAAAGATCCCATAGTTGCA
                      ____________________________________________________________
consensus             AAAGTTAAAGAAAACATTGCAAGTGTGAATGGTTCGATTTCAAAAGATCCCATAGTTGCA
 
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JMCP010E11+           TTGCCAAATATTAACTCAGGAAGTTCATCTGGCCATGATGACAAAGTAGAGAGTCCAGCT
rJMCP008G11+          TTGCCAAATATTAACTCAGGAAGTTCATCTGGCCATGATGACAAAGTAGAGAGTCCAGCT
JMCP003H08+           TTGCCAAATATTGACTCAGGAAGTTCATCTGGCCATGATGACAAAGTAGAGAGTCCAGCT
rJMCP005F12+          TTGCCAAATATTAACTCAGGAAGTTCATCTGGCCATGATGACAAAGTAGAGAGTCCAGCT
rJMCP006A04+          TTGCCAAATATTAACTCAGGAAGTTCATCTGGCCATGATGACAAAGTAGAGAGTCCAcCT
                      ____________________________________________________________
consensus             TTGCCAAATATTAACTCAGGAAGTTCATCTGGCCATGATGACAAAGTAGAGAGTCCAGCT
 
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JMCP010E11+           AATATTACTGAAGGGAATATACCCAACTCAACATTGGAAGGTTGTATTGTTAGTGAGGGC
rJMCP008G11+          AATATTACTGAAGGGAATATACCCAACTCAACATTGGAAGGTTGTATTGTTAGTGAGGGC
JMCP003H08+           AATATTACTGAAGGGAATATACCCAACTCAACATTGGAAGGTTGTATTGTTAGTGAGGGC
rJMCP005F12+          AATATTACTGAAGGGAATATACCCAACTCAACATTGGAAGGTTGTATTGTTAGTGAGGGC
rJMCP006A04+          AATATTACTGAAGGGAATATACCgAtCTCAAgtaTGGAAGGTTGTATTGTTAGTGAGGGC
                      ____________________________________________________________
consensus             AATATTACTGAAGGGAATATACCCAACTCAACATTGGAAGGTTGTATTGTTAGTGAGGGC
 
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JMCP010E11+           CATAACATGGAACAAACacCAcCTAAAAGGGTTCGTAAACCTACGAAACGATATATTGAA
rJMCP008G11+          CATAACATGGAACAAACTGCAGCTAAAAGGGTTCGTAAACCTACGAAACGATATATTGAA
JMCP003H08+           CATAACATGGAACAAACTGCAGCTAAAAGGGTTCGTAAACCTACGAAACGACATATTGAA
rJMCP005F12+          CATAACATGGAACAAACTGCAGCTAAAAGGGTTCGTAAACCTACGAAACGATATATTGAA
rJMCP006A04+          CATAACATGGAACAAACTGCAcCTAAAAGGGTagcTAAACCTACGAAACGATATATTGAA
                      ____________________________________________________________
consensus             CATAACATGGAACAAACTGCAGCTAAAAGGGTTCGTAAACCTACGAAACGATATATTGAA
 
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JMCP010E11+           GAACTTTCAGAAGTGGAATCCAGGGAATCTAGTGGAAAGTCAATGTCTTCAGAGAAAATT
rJMCP008G11+          GAACTTTCAGAAGTGGAATCCAGGGAATCTAGTGGGAAGTCAATGTCTTCAGAGAAAATT
JMCP003H08+           GAACTTTCAGAAGTGGAATCCAGGGAATCTAGTGGAAAGTCAATGTCTTCAGAGAAAATT
rJMCP005F12+          GAACTTTCAGAAGTGGAATCCAGGGAATCTAGTGGAAAGTCAATGTCTTCAGAGAAAATT
rJMCP006A04+          GAACTTTCAGttGTGGAATCgtcGGAAaCaAGTGGtttGTgttacagTTCAGAGAAAATT
                      ____________________________________________________________
consensus             GAACTTTCAGAAGTGGAATCCAGGGAATCTAGTGGAAAGTCAATGTCTTCAGAGAAAATT
 
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JMCP010E11+           TGTGGTTACAAATCAACACATCCAAGTAATCATGTGATATCTATTATGAAA         
rJMCP008G11+          TGTGGTTACAAATCAACACATCCAAGTAATCATGTGATATCTATTATGAAA         
JMCP003H08+           TGTGGTTACAAATCAACACATCCAAGTAATCATGTGATATCTATTATGAAA         
rJMCP005F12+          TGTGGTTACAAATCAACACATCCAAGTAATCATGTGATATCTATTATGAAA         
rJMCP006A04+          TGTGGTTAgttATgttgtgtaggttcaAATgtaGTGAaGTCTATTAacttAGCCCGGCCG
                      ____________________________________________________________
consensus             TGTGGTTACAAATCAACACATCCAAGTAATCATGTGATATCTATTATGAAAGCCCGGCCG