Contig 014139:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP015A01Sequence179014139 (4)ref|YP_173374.1|1e-35hypothetical protein NitaMp027 [Nicotiana tabacum] ref|YP_173501.1| hypothetical
JMFS073E07Sequence616014139 (4)ref|YP_173374.1|2e-60hypothetical protein NitaMp027 [Nicotiana tabacum] ref|YP_173501.1| hypothetical
JMFS091E08Sequence621014139 (4)ref|XP_003588355.1|3e-61Mitochondrial protein, putative [Medicago truncatula]
JMFS153H05Sequence614014139 (4)ref|XP_003588355.1|2e-62Mitochondrial protein, putative [Medicago truncatula]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS153H05+ TGGGGTTGGTAAGGCGAAATGGGGCCACCCTAGCCCATTGAGTGCTCTACCTC
                      ____________________________________________________________
consensus TGGGGTTGGTAAGGCGAAATGGGGCCACCCTAGCCCATTGAGTGCTCTACCTC
 
. : . : . : . : . : . :
JMFS153H05+ GGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATATCCGA
JMFS091E08+ GGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATATCCGA
                      ____________________________________________________________
consensus GGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATATCCGA
 
. : . : . : . : . : . :
JMFS153H05+ TCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGG
JMFS091E08+ TCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGG
                      ____________________________________________________________
consensus TCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGG
 
. : . : . : . : . : . :
JMFS153H05+ TTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGT
JMFS091E08+ TTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGT
                      ____________________________________________________________
consensus TTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGT
 
. : . : . : . : . : . :
JMFS153H05+ TTCGGGTCAAATAGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGG
JMFS091E08+ TTCGGGTCAAATAGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGG
                      ____________________________________________________________
consensus TTCGGGTCAAATAGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGG
 
. : . : . : . : . : . :
JMFS153H05+ CTTAAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGT
JMFS091E08+ CTTAAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGT
                      ____________________________________________________________
consensus CTTAAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGT
 
. : . : . : . : . : . :
JMFS153H05+ GAGTGCGCTTTACATAAAGTAAAGGCTCTAAGCTCCGCTCCTTCGACTGATTGTTCGCAT
JMFS091E08+ GAGTGCGCTTTACATAAAGTAAAGGCTCTAAGCTCCGCTCCTTCGACTGATTGTTCGCAT
                      ____________________________________________________________
consensus GAGTGCGCTTTACATAAAGTAAAGGCTCTAAGCTCCGCTCCTTCGACTGATTGTTCGCAT
 
. : . : . : . : . : . :
JMFS153H05+ CGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTCTTTTCACCTTTCCCTCACGG
JMFS091E08+ CGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTCTTTTCACCTTTCCCTCACGG
                      ____________________________________________________________
consensus CGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTCTTTTCACCTTTCCCTCACGG
 
. : . : . : . : . : . :
JMFS153H05+ TACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCCTTTCTC
JMFS091E08+ TACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCCTTTCTC
                      ____________________________________________________________
consensus TACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCCTTTCTC
 
. : . : . : . : . : . :
JMFS153H05+ GCGTAAAAGCGATCAGAATTCGAACACGCCGCGTTTTACTGGGAAGGATCGAACCATGGG
JMFS091E08+ GCGTAAAAGCGATCAGAATTCGAACACGCCGCGTTTTACTGGGAAGGATCGAACCATGGG
                      ____________________________________________________________
consensus GCGTAAAAGCGATCAGAATTCGAACACGCCGCGTTTTACTGGGAAGGATCGAACCATGGG
 
. : . : . : . : . : . :
JMFS153H05+ AACGAATCTACAGGGCTATCA
JMFS091E08+ AACGAATCTACAGGGCTATCACCTTCTTTGGCCAGATCTTCCAATCTTTTCACAATTACA
JMFS073E07+ TCTTTGGCCAGATCTTCCAATCTTTTCACAATTACA
                      ____________________________________________________________
consensus AACGAATCTACAGGGCTATCACCTTCTTTGGCCAGATCTTCCAATCTTTTCACAATTACA
 
. : . : . : . : . : . :
JMFS091E08+ GTTCACTGCGCCCGCTCCTTCT
JMFS073E07+ GTTCACTGCGCCCGCTCCTTCTAGTGTTGGGCGGCGGCTTGAAAGCTTACCTTATTAGAA
                      ____________________________________________________________
consensus GTTCACTGCGCCCGCTCCTTCTAGTGTTGGGCGGCGGCTTGAAAGCTTACCTTATTAGAA
 
. : . : . : . : . : . :
JMFS073E07+ AGGTTTCCTAGTTTTGGATTTTTGAGTTTTCGCCCCAACCTAGGCTAGGGGGTCGTTAGA
                      ____________________________________________________________
consensus AGGTTTCCTAGTTTTGGATTTTTGAGTTTTCGCCCCAACCTAGGCTAGGGGGTCGTTAGA
 
. : . : . : . : . : . :
JMFS073E07+ CCGTAGCTTGCTGCTGAAAAACGTAATAGGCTAGCGCGGCTCGCTTCGCTCTTCAAGCTC
                      ____________________________________________________________
consensus CCGTAGCTTGCTGCTGAAAAACGTAATAGGCTAGCGCGGCTCGCTTCGCTCTTCAAGCTC
 
. : . : . : . : . : . :
JMFS073E07+ CGCCCCCCTTACTCAACCTCAACATCTATAAAAAAGCCCTTGATTTAGAATAAGGTAAGC
                      ____________________________________________________________
consensus CGCCCCCCTTACTCAACCTCAACATCTATAAAAAAGCCCTTGATTTAGAATAAGGTAAGC
 
. : . : . : . : . : . :
JMFS073E07+ TTTGAAGCCGTAGCTTGCTGGTTTTTCCATCATCCAATCCACAACAAATCGAATGAAACC
                      ____________________________________________________________
consensus TTTGAAGCCGTAGCTTGCTGGTTTTTCCATCATCCAATCCACAACAAATCGAATGAAACC
 
. : . : . : . : . : . :
JMFS073E07+ TGGCGAAAAAGAAGTGAACACTTTGCTGAGGAACGAAGCTTCGTGTTTGTTTTTCTTCAA
                      ____________________________________________________________
consensus TGGCGAAAAAGAAGTGAACACTTTGCTGAGGAACGAAGCTTCGTGTTTGTTTTTCTTCAA
 
. : . : . : . : . : . :
JMFS073E07+ ACCCCCAATCCGCTCTCGCTCGCCGCTACTAACGGGGTCTCGGTTGATTTCCCTTCCTTT
                      ____________________________________________________________
consensus ACCCCCAATCCGCTCTCGCTCGCCGCTACTAACGGGGTCTCGGTTGATTTCCCTTCCTTT
 
. : . : . : . : . : . :
JMFS073E07+ AGCTACTAAGATGTTTCAGTTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCAC
JMCP015A01+ GCTACTAAGATGTTTCAGTTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCAC
                      ____________________________________________________________
consensus AGCTACTAAGATGTTTCAGTTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCAC
 
. : . : . : . : . : . :
JMFS073E07+ GGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATG
JMCP015A01+ GGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATG
                      ____________________________________________________________
consensus GGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATG
 
. : . : . : . : . : . :
JMFS073E07+ GCCTTTCGCCTCTGAAAGCGTCCTTCCTTCTCAATGCCC
JMCP015A01+ GCCTTTCGCCTCTGAAAGCGTCCTTCCTTCTCAATGCCCGGGCATCCATCCAATGCATTC
                      ____________________________________________________________
consensus GCCTTTCGCCTCTGAAAGCGTCCTTCCTTCTCAATGCCCGGGCATCCATCCAATGCATTC