Contig 014139:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP015A01Sequence179014139 (4)ref|YP_173374.1|1e-35hypothetical protein NitaMp027 [Nicotiana tabacum] ref|YP_173501.1| hypothetical
JMFS073E07Sequence616014139 (4)ref|YP_173374.1|2e-60hypothetical protein NitaMp027 [Nicotiana tabacum] ref|YP_173501.1| hypothetical
JMFS091E08Sequence621014139 (4)ref|XP_003588355.1|3e-61Mitochondrial protein, putative [Medicago truncatula]
JMFS153H05Sequence614014139 (4)ref|XP_003588355.1|2e-62Mitochondrial protein, putative [Medicago truncatula]

Alignment

This contig is upended


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JMFS153H05+                  TGGGGTTGGTAAGGCGAAATGGGGCCACCCTAGCCCATTGAGTGCTCTACCTC
                      ____________________________________________________________
consensus                    TGGGGTTGGTAAGGCGAAATGGGGCCACCCTAGCCCATTGAGTGCTCTACCTC
 
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JMFS153H05+           GGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATATCCGA
JMFS091E08+            GGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATATCCGA
                      ____________________________________________________________
consensus             GGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATATCCGA
 
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JMFS153H05+           TCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGG
JMFS091E08+           TCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGG
                      ____________________________________________________________
consensus             TCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGG
 
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JMFS153H05+           TTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGT
JMFS091E08+           TTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGT
                      ____________________________________________________________
consensus             TTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGT
 
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JMFS153H05+           TTCGGGTCAAATAGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGG
JMFS091E08+           TTCGGGTCAAATAGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGG
                      ____________________________________________________________
consensus             TTCGGGTCAAATAGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGG
 
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JMFS153H05+           CTTAAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGT
JMFS091E08+           CTTAAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGT
                      ____________________________________________________________
consensus             CTTAAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGT
 
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JMFS153H05+           GAGTGCGCTTTACATAAAGTAAAGGCTCTAAGCTCCGCTCCTTCGACTGATTGTTCGCAT
JMFS091E08+           GAGTGCGCTTTACATAAAGTAAAGGCTCTAAGCTCCGCTCCTTCGACTGATTGTTCGCAT
                      ____________________________________________________________
consensus             GAGTGCGCTTTACATAAAGTAAAGGCTCTAAGCTCCGCTCCTTCGACTGATTGTTCGCAT
 
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JMFS153H05+           CGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTCTTTTCACCTTTCCCTCACGG
JMFS091E08+           CGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTCTTTTCACCTTTCCCTCACGG
                      ____________________________________________________________
consensus             CGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTCTTTTCACCTTTCCCTCACGG
 
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JMFS153H05+           TACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCCTTTCTC
JMFS091E08+           TACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCCTTTCTC
                      ____________________________________________________________
consensus             TACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCCTTTCTC
 
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JMFS153H05+           GCGTAAAAGCGATCAGAATTCGAACACGCCGCGTTTTACTGGGAAGGATCGAACCATGGG
JMFS091E08+           GCGTAAAAGCGATCAGAATTCGAACACGCCGCGTTTTACTGGGAAGGATCGAACCATGGG
                      ____________________________________________________________
consensus             GCGTAAAAGCGATCAGAATTCGAACACGCCGCGTTTTACTGGGAAGGATCGAACCATGGG
 
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JMFS153H05+           AACGAATCTACAGGGCTATCA                                       
JMFS091E08+           AACGAATCTACAGGGCTATCACCTTCTTTGGCCAGATCTTCCAATCTTTTCACAATTACA
JMFS073E07+                                   TCTTTGGCCAGATCTTCCAATCTTTTCACAATTACA
                      ____________________________________________________________
consensus             AACGAATCTACAGGGCTATCACCTTCTTTGGCCAGATCTTCCAATCTTTTCACAATTACA
 
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JMFS091E08+           GTTCACTGCGCCCGCTCCTTCT                                      
JMFS073E07+           GTTCACTGCGCCCGCTCCTTCTAGTGTTGGGCGGCGGCTTGAAAGCTTACCTTATTAGAA
                      ____________________________________________________________
consensus             GTTCACTGCGCCCGCTCCTTCTAGTGTTGGGCGGCGGCTTGAAAGCTTACCTTATTAGAA
 
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JMFS073E07+           AGGTTTCCTAGTTTTGGATTTTTGAGTTTTCGCCCCAACCTAGGCTAGGGGGTCGTTAGA
                      ____________________________________________________________
consensus             AGGTTTCCTAGTTTTGGATTTTTGAGTTTTCGCCCCAACCTAGGCTAGGGGGTCGTTAGA
 
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JMFS073E07+           CCGTAGCTTGCTGCTGAAAAACGTAATAGGCTAGCGCGGCTCGCTTCGCTCTTCAAGCTC
                      ____________________________________________________________
consensus             CCGTAGCTTGCTGCTGAAAAACGTAATAGGCTAGCGCGGCTCGCTTCGCTCTTCAAGCTC
 
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JMFS073E07+           CGCCCCCCTTACTCAACCTCAACATCTATAAAAAAGCCCTTGATTTAGAATAAGGTAAGC
                      ____________________________________________________________
consensus             CGCCCCCCTTACTCAACCTCAACATCTATAAAAAAGCCCTTGATTTAGAATAAGGTAAGC
 
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JMFS073E07+           TTTGAAGCCGTAGCTTGCTGGTTTTTCCATCATCCAATCCACAACAAATCGAATGAAACC
                      ____________________________________________________________
consensus             TTTGAAGCCGTAGCTTGCTGGTTTTTCCATCATCCAATCCACAACAAATCGAATGAAACC
 
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JMFS073E07+           TGGCGAAAAAGAAGTGAACACTTTGCTGAGGAACGAAGCTTCGTGTTTGTTTTTCTTCAA
                      ____________________________________________________________
consensus             TGGCGAAAAAGAAGTGAACACTTTGCTGAGGAACGAAGCTTCGTGTTTGTTTTTCTTCAA
 
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JMFS073E07+           ACCCCCAATCCGCTCTCGCTCGCCGCTACTAACGGGGTCTCGGTTGATTTCCCTTCCTTT
                      ____________________________________________________________
consensus             ACCCCCAATCCGCTCTCGCTCGCCGCTACTAACGGGGTCTCGGTTGATTTCCCTTCCTTT
 
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JMFS073E07+           AGCTACTAAGATGTTTCAGTTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCAC
JMCP015A01+            GCTACTAAGATGTTTCAGTTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCAC
                      ____________________________________________________________
consensus             AGCTACTAAGATGTTTCAGTTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCAC
 
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JMFS073E07+           GGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATG
JMCP015A01+           GGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATG
                      ____________________________________________________________
consensus             GGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATG
 
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JMFS073E07+           GCCTTTCGCCTCTGAAAGCGTCCTTCCTTCTCAATGCCC                     
JMCP015A01+           GCCTTTCGCCTCTGAAAGCGTCCTTCCTTCTCAATGCCCGGGCATCCATCCAATGCATTC
                      ____________________________________________________________
consensus             GCCTTTCGCCTCTGAAAGCGTCCTTCCTTCTCAATGCCCGGGCATCCATCCAATGCATTC