Contig 014135:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF052L22Sequence608014135 (2)emb|CBI35770.3|2e-09unnamed protein product [Vitis vinifera]850014135 (2)ref|XP_011041476.1|120PREDICTED: uncharacterized protein LOC105137438 [Populus euphratica]

Alignment

This contig is upended


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JMSF052L22-                                           GGAAGACCACTTCCGCTGCTCATGGCGG
                      ____________________________________________________________
consensus                                             GGAAGACCACTTCCGCTGCTCATGGCGG
 
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JMSF052L22-           TGGTCTTCTTCTCCATCCTACGCCAAAATCTCACCGATTGCCAATTTTTCTCTTCATCCC
                      ____________________________________________________________
consensus             TGGTCTTCTTCTCCATCCTACGCCAAAATCTCACCGATTGCCAATTTTTCTCTTCATCCC
 
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JMSF052L22-           TCACCACCTCCGCAACTCTGCAGTGCCGAAACACCTTATTCTGCATCCGCTCATACTCTG
                      ____________________________________________________________
consensus             TCACCACCTCCGCAACTCTGCAGTGCCGAAACACCTTATTCTGCATCCGCTCATACTCTG
 
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JMSF052L22-           CAGGTCTCGCCGCTGGGACTCCAATGCTGAGACCTTCAGGACCCAGAATTTCAACTTTAA
rJMSF052L22+                                                            TCAACTTTAA
                      ____________________________________________________________
consensus             CAGGTCTCGCCGCTGGGACTCCAATGCTGAGACCTTCAGGACCCAGAATTTCAACTTTAA
 
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JMSF052L22-           CGGAGATGAGGATGAAGAAGAAGATGATGATGATGGAGAAGGAGGCTTCCCTGATTTTAT
rJMSF052L22+          CGGAGATGAGGATGAAGAAGAAGATGATGATGATGGAGAAGGAGGCTTCCCTGATTTTAT
                      ____________________________________________________________
consensus             CGGAGATGAGGATGAAGAAGAAGATGATGATGATGGAGAAGGAGGCTTCCCTGATTTTAT
 
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JMSF052L22-           TGATGAGTTTCTTGATAATATTTGGATTCTTAAGTGCAGTTTTTCCAGTCCTATGGCTGG
rJMSF052L22+          TGATGAGTTTCTTGATAATATTTGGATTCTTAAGTGCAGTTTTTCCAGTCCTATGGCTGG
                      ____________________________________________________________
consensus             TGATGAGTTTCTTGATAATATTTGGATTCTTAAGTGCAGTTTTTCCAGTCCTATGGCTGG
 
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JMSF052L22-           ACATTTCCACCGATTATTTTGTCTATACTGATCTCTAGCGGTCTTAAAGCTTTCCTTATG
rJMSF052L22+          ACATTTCCACCGATTATTTTGTCTATACTGATCTCTAGCGGTCTTAAAGCTTTCCTTATG
                      ____________________________________________________________
consensus             ACATTTCCACCGATTATTTTGTCTATACTGATCTCTAGCGGTCTTAAAGCTTTCCTTATG
 
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JMSF052L22-           GCCTTAGCTCTTCCCGTAGGGCAATCAGTGCTTACCTTTTCATTTCAAAAGTTGTGGGGC
rJMSF052L22+          GCCTTAGCTCTTCCCGTAGGGCAATCAGTGCTTACCTTTTCATTTCAAAAGTTGTGGGGC
                      ____________________________________________________________
consensus             GCCTTAGCTCTTCCCGTAGGGCAATCAGTGCTTACCTTTTCATTTCAAAAGTTGTGGGGC
 
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JMSF052L22-           TTGGCACAAAACAAACCAAGGCGCAAGAATCAGAAGAGGCCCCGGAACCGCACTCCCATA
rJMSF052L22+          TTGGCACAAAACAAACCAAGGCGCAAGAATCAGAAGAGGCCCCGGAACCGCACTCCCATA
                      ____________________________________________________________
consensus             TTGGCACAAAACAAACCAAGGCGCAAGAATCAGAAGAGGCCCCGGAACCGCACTCCCATA
 
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JMSF052L22-           AACAATAACGTCAGGAGAAAAGGACAAAGGCCAAGCACTAGAAACGGAAAGACGGGTTAT
rJMSF052L22+          AACAATAACGTCAGGAGAAAAGGACAAAGGCCAAGCACTAGAAACGGAAAGACGGGTTAT
                      ____________________________________________________________
consensus             AACAATAACGTCAGGAGAAAAGGACAAAGGCCAAGCACTAGAAACGGAAAGACGGGTTAT
 
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JMSF052L22-           CGACCAGGGACCACGAGAGTTTATGACTCCCCTAGTAGGA                    
rJMSF052L22+          CGACCAGGGACCACGAGAGTTTATGACTCCCCTAGTAGGAACGACCAAGATGCACCTACT
                      ____________________________________________________________
consensus             CGACCAGGGACCACGAGAGTTTATGACTCCCCTAGTAGGAACGACCAAGATGCACCTACT
 
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rJMSF052L22+          TTCGGTGGTTGGGACGAACTAGATCAAAGAAGGGACTTTAATATGGAGCCGCCTCAACCA
                      ____________________________________________________________
consensus             TTCGGTGGTTGGGACGAACTAGATCAAAGAAGGGACTTTAATATGGAGCCGCCTCAACCA
 
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rJMSF052L22+          TCAGTTGGACCGTCGAGGACAGCTACAGAGAAAGGAAAGTTGAATAGGAGCGGGAGGGAA
                      ____________________________________________________________
consensus             TCAGTTGGACCGTCGAGGACAGCTACAGAGAAAGGAAAGTTGAATAGGAGCGGGAGGGAA
 
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rJMSF052L22+          AATGGCGCACCCTTGTTGCTAAGGTTGCTGATTGCCGTTTTCCCGTTCTTGAGTTCATGG
                      ____________________________________________________________
consensus             AATGGCGCACCCTTGTTGCTAAGGTTGCTGATTGCCGTTTTCCCGTTCTTGAGTTCATGG
 
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rJMSF052L22+          ACTAAGATGCTATAGTTAGTCTGCTTTGATGTGGTTTCACTGACAACAGAGCTAAAGTTC
                      ____________________________________________________________
consensus             ACTAAGATGCTATAGTTAGTCTGCTTTGATGTGGTTTCACTGACAACAGAGCTAAAGTTC
 
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rJMSF052L22+          TTTCCTGTAATTCATCAGGACATAGTATCCACACCAGTAAGCCTCATTTTGATTTGAACT
                      ____________________________________________________________
consensus             TTTCCTGTAATTCATCAGGACATAGTATCCACACCAGTAAGCCTCATTTTGATTTGAACT
 
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rJMSF052L22+          GGGCTTAAAATATTTTTTGCACCATAAAAATTCCCAAAACTGGGTTCATAGATTCTATTC
                      ____________________________________________________________
consensus             GGGCTTAAAATATTTTTTGCACCATAAAAATTCCCAAAACTGGGTTCATAGATTCTATTC
 
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rJMSF052L22+          TTATTCTAACTTTTTGTATTCAAGAGAAATATAGGGAGTGTATTACTCATTCTTGTATTG
                      ____________________________________________________________
consensus             TTATTCTAACTTTTTGTATTCAAGAGAAATATAGGGAGTGTATTACTCATTCTTGTATTG