| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF012B01 | Sequence | 482 | 013284 (3) | gb|EYU21218.1| | 1e-11 | hypothetical protein MIMGU_mgv1a003772mg [Erythranthe guttata] | 678 | 014131 (3) | ref|XP_009803446.1| | 1e-55 | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like, partial [N |
| JMSF046E24 | Sequence | 719 | 013284 (3) | ref|XP_009803447.1| | 7e-85 | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Nicotiana | 765 | 014131 (3) | ref|XP_009803446.1| | 9e-80 | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like, partial [N |
| JMSF052A12 | Sequence | 704 | 013284 (3) | ref|XP_009803447.1| | 5e-62 | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Nicotiana | 812 | 014131 (3) | ref|XP_009803446.1| | 5e-89 | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like, partial [N |
This contig is upended
. : . : . : . : . : . :
rJMSF052A12+ CTACCAGTCAACACCTACGAAATTGGCTGGAGA
____________________________________________________________
consensus CTACCAGTCAACACCTACGAAATTGGCTGGAGA
. : . : . : . : . : . :
rJMSF046E24+ TACTTTTTCAGTAACGGGCAGGATATGAGCGTGGGCACATCATGGAACATACTGAG
rJMSF052A12+ GAACTACTTTTTCAGTAACGGGCAGGATATGAGCGTGGGCACATCATGGAACATACTGAG
____________________________________________________________
consensus GAACTACTTTTTCAGTAACGGGCAGGATATGAGCGTGGGCACATCATGGAACATACTGAG
. : . : . : . : . : . :
rJMSF046E24+ GCCCGAGACAGTTGAATCCTTATTTTATCTTTGGCGTATAACTGGAAACAAGACATACCA
rJMSF012B01+ GTATAACTGGAAACAAGACATACCA
rJMSF052A12+ GCCCGAGACAGTTGAATCCTTATTTTATCTTTGGCGTATAACTGGAAACAAGACATACCA
____________________________________________________________
consensus GCCCGAGACAGTTGAATCCTTATTTTATCTTTGGCGTATAACTGGAAACAAGACATACCA
. : . : . : . : . : . :
rJMSF046E24+ GGAATGGGGTTGGAACATATTTCAAGCATTTGAAAAGAACTCCCGCGTAGAGGCTGGATA
rJMSF012B01+ GGAATGGGGTTGGAACATATTTCAAGCATTTGAAAAGAACTCCCGCGTAGAGGCTGGATA
rJMSF052A12+ GGAATGGGGTTGGAACATATTTCAAGCATTTGAAAAGAACTCCCGCGTAGAGGCTGGATA
____________________________________________________________
consensus GGAATGGGGTTGGAACATATTTCAAGCATTTGAAAAGAACTCCCGCGTAGAGGCTGGATA
. : . : . : . : . : . :
rJMSF046E24+ CGTTGGACTAAAAGACGTTAACACCGGTGTCAAAGACAACATGATGCAAAGCTTCTTTCT
rJMSF012B01+ CGTTGGACTAAAAGACGTTAACACCGGTGTCAAAGACAACATGACGCAAAGCTTCTTTCT
rJMSF052A12+ CGTTGGACTAAAAGACGTTAACACCGGTGTCAAAGACAACATGATGCAAAGCTTCTTTCT
____________________________________________________________
consensus CGTTGGACTAAAAGACGTTAACACCGGTGTCAAAGACAACATGATGCAAAGCTTCTTTCT
. : . : . : . : . : . :
rJMSF046E24+ CGCGGAGACGCTCAAGTATCTCTATCTTCTTTTCTCGCCACCCTCGGTGATTCCCCTGGA
rJMSF012B01+ CGCGGAGACGCTCAAGTATCTCTATCTTCTTTTCTCGCCACCCTCGGTGATTCCCCTGGA
rJMSF052A12+ CGCGGAGACGCTCAAGTATCTCTATCTTCTTTTCTCGCCACCCTCGGTGATTCCCCTGGA
____________________________________________________________
consensus CGCGGAGACGCTCAAGTATCTCTATCTTCTTTTCTCGCCACCCTCGGTGATTCCCCTGGA
. : . : . : . : . : . :
rJMSF046E24+ CCAGTGGGTTTTCAACACAGAAGCCCACCCTCTAAAAATCGTTACCAGGCGTGATCATGC
rJMSF012B01+ CCAGTGGGTTTTCAACACAGAAGCCCACCCTCTAAAAATCGTTACCAGGCGTGATCATGC
rJMSF052A12+ CCAGTGGGTTTTCAACACAGAAGCCCACCCTCTAAAAATCGTTACCAGGCGTGATCATGC
____________________________________________________________
consensus CCAGTGGGTTTTCAACACAGAAGCCCACCCTCTAAAAATCGTTACCAGGCGTGATCATGC
. : . : . : . : . : . :
rJMSF046E24+ TGTGAGCTCCGGTAAGCATGGATCAGAGCACCAATCACGCAGTAGGAAAGAAGGGAGATT
rJMSF012B01+ TGTGAGCTCCGGTAAGCATGGATCAGAGCACCAATCACGCAGTAGGAAAGAAGGGAGATT
rJMSF052A12+ TGTGAGCTCCGGTAAGCATGGATCAGAGCACCAATCACGCAGTAGGAAAGAAGGGAGATT
____________________________________________________________
consensus TGTGAGCTCCGGTAAGCATGGATCAGAGCACCAATCACGCAGTAGGAAAGAAGGGAGATT
. : . : . : . : . : . :
rJMSF046E24+ TGGTCATTAGGACATACACACATTCACACAACATCAAACTTGATCCTTCAAGTTTCACCA
rJMSF012B01+ TGGTCATTAGGACATACACACATTCACACAACATCAAACTTGATCCTTCAAGTTTCACCA
rJMSF052A12+ TGGTCATTAGGACATACACACATTCACACAACATCAAACTTGATCCTTCAAGTTTCACCA
____________________________________________________________
consensus TGGTCATTAGGACATACACACATTCACACAACATCAAACTTGATCCTTCAAGTTTCACCA
. : . : . : . : . : . :
rJMSF046E24+ AAGCCATAGAGATCTAATCACTCGATGTAGGCGAAGATGTTTGAATTGATGATGTTCTGG
rJMSF012B01+ AAGCCATAGAGATCTAATCACTCGATGTAGGCGAAGATGTTTGAATTGATGATGTTCTGG
rJMSF052A12+ AAGCCATAGAGATCTAATCACTCGATGTAGGCGAAGATGTTTGAATTGATGATGTTCTGG
____________________________________________________________
consensus AAGCCATAGAGATCTAATCACTCGATGTAGGCGAAGATGTTTGAATTGATGATGTTCTGG
. : . : . : . : . : . :
rJMSF046E24+ CGTTTATGACAGTAGGGATTCGAGGAAACAGACTTTCGAAAATAATTGCTAATCCTCAGC
rJMSF012B01+ CGTTTATGACAGTAGGGATTCGAGGAAACAGACTTTCGAAAATAATTGCTAATCCTCAGC
rJMSF052A12+ CGTTTATGACAGTAGGGATTCGAGGAAACAGACTTTCGAAAATAATTGCTAATCCTCAGC
____________________________________________________________
consensus CGTTTATGACAGTAGGGATTCGAGGAAACAGACTTTCGAAAATAATTGCTAATCCTCAGC
. : . : . : . : . : . :
rJMSF046E24+ TTTCCGGATTGGTGGTGATATCATTGATTGATTCTGCCATGAAACAGAGCTCAGGTTTAT
rJMSF012B01+ TTTCCGGATTGGTGGTGATATCATTGATTGATTCTGCCATGAAACAGAGCTCAGGTTTAT
rJMSF052A12+ TTTCCGGATTGGTGGTGATATCATTGATTGATTCTGCCATGAAACAGAGCTCAGGTTTAT
____________________________________________________________
consensus TTTCCGGATTGGTGGTGATATCATTGATTGATTCTGCCATGAAACAGAGCTCAGGTTTAT
. : . : . : . : . : . :
rJMSF046E24+ GTAACATGAGAGTATAGTGCCCTTATAGGTTTACACAACACAACATTCTTGGGATGTT-A
rJMSF012B01+ GTAACATGAGAGTATAGTGCCCTTATAGGTTTACACAACACAACATTCTTGGGATGTTAA
rJMSF052A12+ GTAACATGAGAGTATAGTGCCCTTATAGGTTTACACAACACAACATTCTTGGGATGTT-A
____________________________________________________________
consensus GTAACATGAGAGTATAGTGCCCTTATAGGTTTACACAACACAACATTCTTGGGATGTT-A
. : . : . : . : . : . :
rJMSF046E24+ CTACGTTTTTTTTGTAGGCAAATGTTCATCTTTTAC
rJMSF012B01+ CTACGTTTTTTTTGTAGGCAAATGTTCATCTTTTAC
rJMSF052A12+ CTACGTTTTTTTTGTAGGCAAATGTTCATCTTTTACACTGCTCTTAGTACTGTTTTTTCT
____________________________________________________________
consensus CTACGTTTTTTTTGTAGGCAAATGTTCATCTTTTACACTGCTCTTAGTACTGTTTTTTCT