clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF013L17 | Sequence | 529 | 014130 (4) | ref|XP_004232556.1| | 4e-40 | PREDICTED: phosphoserine aminotransferase 2, chloroplastic-like [Solanum lycope | 773 | 014130 (4) | ref|XP_010266695.1| | 3e-105 | PREDICTED: phosphoserine aminotransferase 1, chloroplastic-like [Nelumbo nucife |
JMSF051P21 | Sequence | 695 | 014130 (4) | ref|XP_009603772.1| | 2e-151 | PREDICTED: phosphoserine aminotransferase 2, chloroplastic-like [Nicotiana tome | 745 | 014130 (4) | ref|XP_010266695.1| | 2e-92 | PREDICTED: phosphoserine aminotransferase 1, chloroplastic-like [Nelumbo nucife |
This contig is upended
. : . : . : . : . : . :
JMFF013L17- GTGACGGAGTCCCTTCCCCAGCTGGAGAAACGAAAGATGGCGAAGA
____________________________________________________________
consensus GTGACGGAGTCCCTTCCCCAGCTGGAGAAACGAAAGATGGCGAAGA
. : . : . : . : . : . :
JMFF013L17- ACGAGGTTATCAGGAAGGCGGAGGAGTTGGTGGAGAAAGCCACCTTCCCCCACACCGTTT
____________________________________________________________
consensus ACGAGGTTATCAGGAAGGCGGAGGAGTTGGTGGAGAAAGCCACCTTCCCCCACACCGTTT
. : . : . : . : . : . :
JMFF013L17- CCCCTCCCTCCACCACCAAGGCTGTCGCCGCCAAATCCATTTCCATCACCTGCAACTCGG
____________________________________________________________
consensus CCCCTCCCTCCACCACCAAGGCTGTCGCCGCCAAATCCATTTCCATCACCTGCAACTCGG
. : . : . : . : . : . :
JMFF013L17- CAGCCAATGCCGCCGCCGCCGCGCCAGTCCAAACTCCGCCGCCGTCCGCCGTCTCCTCAG
____________________________________________________________
consensus CAGCCAATGCCGCCGCCGCCGCGCCAGTCCAAACTCCGCCGCCGTCCGCCGTCTCCTCAG
. : . : . : . : . : . :
JMFF013L17- ATCGCGTCTTCAACTTCGCCGCCGGTCCCGCCACTCTTCCCGTGAACGTCCTCGAGAAGG
JMSF051P21- AAGG
____________________________________________________________
consensus ATCGCGTCTTCAACTTCGCCGCCGGTCCCGCCACTCTTCCCGTGAACGTCCTCGAGAAGG
. : . : . : . : . : . :
JMFF013L17- CCCAGGCTGAGCTCGTGAACTGGCGCGGCTCCGGCATGTCTGTCATGGAGATGAGCCACC
JMSF051P21- CCCAGGCTGAGCTCGTGAACTGGCGCGGCTCCGGCATGTCTGTCATGGAGATGAGCCACC
____________________________________________________________
consensus CCCAGGCTGAGCTCGTGAACTGGCGCGGCTCCGGCATGTCTGTCATGGAGATGAGCCACC
. : . : . : . : . : . :
JMFF013L17- GCGGGAAGGAGTTCGTCTCCATCATTCAGAAAGCCGAGGCAGATCTGCGGGCTCTCCTCG
JMSF051P21- GCGGGAAGGAGTTCGTCTCCATCATTCAGAAAGCCGAGGCAGATCTGCGGGCTCTCCTCG
____________________________________________________________
consensus GCGGGAAGGAGTTCGTCTCCATCATTCAGAAAGCCGAGGCAGATCTGCGGGCTCTCCTCG
. : . : . : . : . : . :
JMFF013L17- GCATCCCTGAGGGATTACGCGGTCCTCTTCCTCCAGGGCGGCGCCACCACCCAATTCGCC
JMSF051P21- GCATCCCCGA-GGATTACGCGGTCCTCTTCCTCCAGGGCGGCGCCACCACCCAATTCGCC
____________________________________________________________
consensus GCATCCCTGAGGGATTACGCGGTCCTCTTCCTCCAGGGCGGCGCCACCACCCAATTCGCC
. : . : . : . : . : . :
JMFF013L17- GCCGTGCCGCTCAACATCTGCGCCCCTGACGACACCGTCNATTACATAGTCACCGGTTCG
JMSF051P21- GCCGTGCCGCTCAACATCTGCGCCCCTGACGACACCGTCGATTACATAGTCACCGGTTCG
____________________________________________________________
consensus GCCGTGCCGCTCAACATCTGCGCCCCTGACGACACCGTCGATTACATAGTCACCGGTTCG
. : . : . : . : . : . :
JMFF013L17- TGG
JMSF051P21- TGGGGAGACAAGGCCTACAAGGAAGCAGTAAAGTACTGCAAGCCCAACGTGATCTGGAGC
____________________________________________________________
consensus TGGGGAGACAAGGCCTACAAGGAAGCAGTAAAGTACTGCAAGCCCAACGTGATCTGGAGC
. : . : . : . : . : . :
JMSF051P21- GGAAAATCGGAGAAATACACCAAGATCCCCAGCTTCGACTCGCTGGAACAGACCCCGCAC
____________________________________________________________
consensus GGAAAATCGGAGAAATACACCAAGATCCCCAGCTTCGACTCGCTGGAACAGACCCCGCAC
. : . : . : . : . : . :
JMSF051P21- GCCAAGTGTTTGCATATATGCGCCAATGAGACCATTCACGGTGTGGAATTAAAAAATTAC
____________________________________________________________
consensus GCCAAGTGTTTGCATATATGCGCCAATGAGACCATTCACGGTGTGGAATTAAAAAATTAC
. : . : . : . : . : . :
JMSF051P21- CCGACCCCCAAGAATCCGAACGCCGTTCTTGTTGCCGATATGTCATCCAATTTTTGTTCC
____________________________________________________________
consensus CCGACCCCCAAGAATCCGAACGCCGTTCTTGTTGCCGATATGTCATCCAATTTTTGTTCC
. : . : . : . : . : . :
JMSF051P21- AAGCCCGTCGACGTTTCCAAATTCGGTATCATCTACGCCGGAGCCCAGAAAAACGTTGGC
rJMFF013L17+ GTCGACGTTTCCAAATTCGGTATCATNTACGCCGGAGCCCAGAAAAACGTTGGC
____________________________________________________________
consensus AAGCCCGTCGACGTTTCCAAATTCGGTATCATCTACGCCGGAGCCCAGAAAAACGTTGGC
. : . : . : . : . : . :
JMSF051P21- CCTTCAGGCGTCACCATTGTAATAATCCGTAAAGATTTGATCGGAAATGCACAGCCAGTT
rJMFF013L17+ CCTTCAGGCGTCACCATTGTAATAATCCGTAAAGATTTGATCGGAAATGCACAGCCAGTT
____________________________________________________________
consensus CCTTCAGGCGTCACCATTGTAATAATCCGTAAAGATTTGATCGGAAATGCACAGCCAGTT
. : . : . : . : . : . :
JMSF051P21- ACTCCTGTAATGCTGGACTACAAGATCCACGCGGATAACAATTCGCTGTATAACACTCCC
rJMFF013L17+ ACTCCTGTAATGCTGGACTACAAGATCCACGCGGATAACAATTCGCTGTATAACACTCCC
rJMSF051P21+ ACTCCTGTAATGCTGGACTACAAGATCCACGCGGATAACAATTCGCTGTATAACACTCCC
____________________________________________________________
consensus ACTCCTGTAATGCTGGACTACAAGATCCACGCGGATAACAATTCGCTGTATAACACTCCC
. : . : . : . : . : . :
JMSF051P21- CCTTGTTATGGGATTTACATGTGCGGCCTAGT
rJMFF013L17+ CCTTGTTATGGGATTTACATGTGCGGCCTAGTTTTTGAAGATCTGTTGGCTCAGGGTGGA
rJMSF051P21+ CCTTGTTATGGGATTTACATGTGCGGCCTAGTTTTTGAAGATCTGTTGGCTCAGGGTGGA
____________________________________________________________
consensus CCTTGTTATGGGATTTACATGTGCGGCCTAGTTTTTGAAGATCTGTTGGCTCAGGGTGGA
. : . : . : . : . : . :
rJMFF013L17+ CTGGGAGAAGTGGAGAAGAAGAACAAGAAGAAAGCTGACATTTTGTACCAGACTATAGAT
rJMSF051P21+ CTGGGAGAAGTGGAGAAGAAGAACAAGAAGAAAGCTGACATTTTGTACCAGACTATAGAT
____________________________________________________________
consensus CTGGGAGAAGTGGAGAAGAAGAACAAGAAGAAAGCTGACATTTTGTACCAGACTATAGAT
. : . : . : . : . : . :
rJMFF013L17+ TCTAGCAATGGGTTCTACAGGTGCCCAGTTGAGAAATCTGTAAGGTCATTGATGAATGTG
rJMSF051P21+ TCTAGCAATGGGTTCTACAGGTGCCCAGTTGAGAAATCTGTAAGGTCATTGATGAATGTG
____________________________________________________________
consensus TCTAGCAATGGGTTCTACAGGTGCCCAGTTGAGAAATCTGTAAGGTCATTGATGAATGTG
. : . : . : . : . : . :
rJMFF013L17+ CCCTTTACACTGCCAAAATCTGAGTTGGAAGCTGAGTTTATAAAGGAGGCTGCTGCAGAG
rJMSF051P21+ CCCTTTACACTGCCAAAATCTGAGTTGGAAGCTGAGTTTATAAAGGAGGCTGCTGCAGAG
____________________________________________________________
consensus CCCTTTACACTGCCAAAATCTGAGTTGGAAGCTGAGTTTATAAAGGAGGCTGCTGCAGAG
. : . : . : . : . : . :
rJMFF013L17+ AAGATGGTGCAGCTCAAAGGGCATAGGTCAGTAGGAGGAATGAGAGCTTCAATCTACAAT
rJMSF051P21+ AAGATGGTGCAGCTCAAAGGGCATAGGTCAGTAGGAGGAATGAGAGCTTCAATCTACAAT
____________________________________________________________
consensus AAGATGGTGCAGCTCAAAGGGCATAGGTCAGTAGGAGGAATGAGAGCTTCAATCTACAAT
. : . : . : . : . : . :
rJMFF013L17+ GCTATGCCCTTGGCTGGAGTGGAAAAGCTGGTTGCTTTCATGAAGGATTTCCAGGCAAGG
rJMSF051P21+ GCTATGCCCTTGGCTGGAGTGGAAAAGCTGGTTGCTTTCATGAAGGATTTCCAGGCAAGG
____________________________________________________________
consensus GCTATGCCCTTGGCTGGAGTGGAAAAGCTGGTTGCTTTCATGAAGGATTTCCAGGCAAGG
. : . : . : . : . : . :
rJMFF013L17+ CATGGTT
rJMSF051P21+ CATGGTTGAGGACTTGAGGTCTTGTTAAATACTGCCATGATCTATTTGGTTCAAGCTTTA
____________________________________________________________
consensus CATGGTTGAGGACTTGAGGTCTTGTTAAATACTGCCATGATCTATTTGGTTCAAGCTTTA
. : . : . : . : . : . :
rJMSF051P21+ AAGTTACTTTTTTCTTTACATTGCCTATCATGAATCTGCTTTATGCTTTACCTCTATGAT
____________________________________________________________
consensus AAGTTACTTTTTTCTTTACATTGCCTATCATGAATCTGCTTTATGCTTTACCTCTATGAT
. : . : . : . : . : . :
rJMSF051P21+ TCTACTTGTCTATATGGGTAGAGTTTGGCAGCTTTGGGAATATGGTTGATGCTAAGCAAT
____________________________________________________________
consensus TCTACTTGTCTATATGGGTAGAGTTTGGCAGCTTTGGGAATATGGTTGATGCTAAGCAAT
. : . : . : . : . : . :
rJMSF051P21+ GCAATTTGTTTAGCTTATCTGTTCTTGTTTTCTATGTAAGAATTTTGAAATGTGAGCAGC
____________________________________________________________
consensus GCAATTTGTTTAGCTTATCTGTTCTTGTTTTCTATGTAAGAATTTTGAAATGTGAGCAGC