Contig 014128:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS086C11Sequence631014128 (2)ref|XP_009776133.1|1e-93PREDICTED: protein FAR1-RELATED SEQUENCE 3 isoform X3 [Nicotiana sylvestris]
JMSF051K10Sequence681003362 (5)ref|XP_006361134.1|2e-50PREDICTED: protein FAR1-RELATED SEQUENCE 3-like isoform X1 [Solanum tuberosum] 765014128 (2)ref|XP_009609281.1|2e-83PREDICTED: protein FAR1-RELATED SEQUENCE 3 isoform X3 [Nicotiana tomentosiformi

Alignment

This contig is upended


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JMFS086C11- G
                      ____________________________________________________________
consensus G
 
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JMFS086C11- AAACATACAATGTGGCTTTGAGTGCTCTTAAAGAAGCAAAGAAGAAGGTTTCTGCTGCAA
                      ____________________________________________________________
consensus AAACATACAATGTGGCTTTGAGTGCTCTTAAAGAAGCAAAGAAGAAGGTTTCTGCTGCAA
 
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JMFS086C11- AGAAAAATGTTGCTAGAGTCATACCTCCCAACTCACAGGTCAGTGGTGTTTATGATGATC
                      ____________________________________________________________
consensus AGAAAAATGTTGCTAGAGTCATACCTCCCAACTCACAGGTCAGTGGTGTTTATGATGATC
 
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JMFS086C11- GGAGGTCATCCGGTTCTGCTCCGGATATGAACCCTATACTGTGGCCTTGCCAGGATGAAA
                      ____________________________________________________________
consensus GGAGGTCATCCGGTTCTGCTCCGGATATGAACCCTATACTGTGGCCTTGCCAGGATGAAA
 
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JMFS086C11- TGATGAAACACTTTAATCTCAATGTTTGCGTTCCTACTAAACCTGTCACTGATCTCAACA
rJMSF051K10+ ATCTCAATGTTTGCGTTCCTACTAAACCTGTCACTGATCTCAACA
                      ____________________________________________________________
consensus TGATGAAACACTTTAATCTCAATGTTTGCGTTCCTACTAAACCTGTCACTGATCTCAACA
 
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JMFS086C11- TTCCTCGCATGGCCCCTGTTTCCGTTCACCGTGATGATGGTCACACGGATAACATGGTGA
rJMSF051K10+ TTCCTCGCATGGCCCCTGTTTCCGTTCACCGTGATGATGGTCACACGGATAACATGGTGA
                      ____________________________________________________________
consensus TTCCTCGCATGGCCCCTGTTTCCGTTCACCGTGATGATGGTCACACGGATAACATGGTGA
 
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JMFS086C11- GCCTTCCTTGTCTTAAGTCAATGACTTGGGTGATGGAGAACAAAAGTTCAACACCTGCGA
rJMSF051K10+ GCCTTCCTTGTCTTAAGTCAATGACTTGGGTGATGGAGAACAAAAGTTCAACACCTGCGA
                      ____________________________________________________________
consensus GCCTTCCTTGTCTTAAGTCAATGACTTGGGTGATGGAGAACAAAAGTTCAACACCTGCGA
 
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JMFS086C11- ATAGAGTAGCTGTTATCAATCTCAAG
rJMSF051K10+ ATAGAGTAGCTGTTATCAATCTCGAGTTGCAAGATTATAGCAGGTCTACTCCACAAGAAT
                      ____________________________________________________________
consensus ATAGAGTAGCTGTTATCAATCTCGAGTTGCAAGATTATAGCAGGTCTACTCCACAAGAAT
 
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rJMSF051K10+ CAGAGGTTAAGTTTCAACTGTCCAAGATCACTCTGGAGCCCATGTTGAAATCTATGGCTT
                      ____________________________________________________________
consensus CAGAGGTTAAGTTTCAACTGTCCAAGATCACTCTGGAGCCCATGTTGAAATCTATGGCTT
 
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rJMSF051K10+ ATATCAGTGAGCAGCTCTCTACTGCCAATAGGGTTGCTGTTATCAATTTGAAGCTTCAGG
                      ____________________________________________________________
consensus ATATCAGTGAGCAGCTCTCTACTGCCAATAGGGTTGCTGTTATCAATTTGAAGCTTCAGG
 
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rJMSF051K10+ ATACAGAAACAACTTCAGGAGAATCAGAGGTGAAATTTCAGGTGTCTAGAGATACTTTAG
                      ____________________________________________________________
consensus ATACAGAAACAACTTCAGGAGAATCAGAGGTGAAATTTCAGGTGTCTAGAGATACTTTAG
 
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rJMSF051K10+ GTGCAATGTTGAGGTCCATGGCTTATATCCGTGAGCAGCTCTCGAATACAGTTGAACCCC
                      ____________________________________________________________
consensus GTGCAATGTTGAGGTCCATGGCTTATATCCGTGAGCAGCTCTCGAATACAGTTGAACCCC
 
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rJMSF051K10+ AAGTCGAGACTCCAAGTAAGAAACAAAGGAAGTAGAGATTGCATCTTCTTATCCACATTC
                      ____________________________________________________________
consensus AAGTCGAGACTCCAAGTAAGAAACAAAGGAAGTAGAGATTGCATCTTCTTATCCACATTC
 
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rJMSF051K10+ AGGCTCGTGACAACAACCACATCTCGAAGTGGAACAGATGGGTGTTGTCTTCTTGTTAAA
                      ____________________________________________________________
consensus AGGCTCGTGACAACAACCACATCTCGAAGTGGAACAGATGGGTGTTGTCTTCTTGTTAAA
 
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rJMSF051K10+ TACTTGCTCCATATACAGTGAGGTTGAGTAGTGTAAGCTTTCTGTGTAGCTACTGGTAGG
                      ____________________________________________________________
consensus TACTTGCTCCATATACAGTGAGGTTGAGTAGTGTAAGCTTTCTGTGTAGCTACTGGTAGG
 
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rJMSF051K10+ TTAGTTCCTCTTTGCTTTTTGTCTCCATTTATATGCTCTCCTCTTCACATTTTTGTACAT
                      ____________________________________________________________
consensus TTAGTTCCTCTTTGCTTTTTGTCTCCATTTATATGCTCTCCTCTTCACATTTTTGTACAT
 
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rJMSF051K10+ GTAATTTTTGAAAGCTAGGAATGGAAGATCAGGTCTTTTCTTATGTATGTGGCTGATCAT
                      ____________________________________________________________
consensus GTAATTTTTGAAAGCTAGGAATGGAAGATCAGGTCTTTTCTTATGTATGTGGCTGATCAT