Contig 014124:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028O06Sequence457013572 (3)623014124 (3)emb|CDP04498.1|1e-67unnamed protein product [Coffea canephora]
JMFS006G05Sequence576014124 (3)ref|XP_011095947.1|2e-98PREDICTED: U-box domain-containing protein 4-like [Sesamum indicum] ref|XP_01109
JMSF050P12Sequence632013572 (3)ref|XP_006352348.1|1e-24PREDICTED: U-box domain-containing protein 4-like [Solanum tuberosum]752014124 (3)emb|CDP04498.1|2e-53unnamed protein product [Coffea canephora]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS006G05-                                                             CGAAGTTGAG
                      ____________________________________________________________
consensus                                                               CGAAGTTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS006G05-           GCTTTTAGCGAAGAACCGAGCCGACAATCGGGCTTTGATCGGAGAGTCCGGTGCGATACA
                      ____________________________________________________________
consensus             GCTTTTAGCGAAGAACCGAGCCGACAATCGGGCTTTGATCGGAGAGTCCGGTGCGATACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS006G05-           GAAGCTCGTGCCGCTGCTCCGCTGCTCCGATCCCTTGACTCAAGAGCACGCCGTCACGGC
                      ____________________________________________________________
consensus             GAAGCTCGTGCCGCTGCTCCGCTGCTCCGATCCCTTGACTCAAGAGCACGCCGTCACGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS006G05-           GCTCTTAAACCTCTCTCTTCACGAGCCTAACAAGGCCATTATCACCAACGCCGGCGCGAT
                      ____________________________________________________________
consensus             GCTCTTAAACCTCTCTCTTCACGAGCCTAACAAGGCCATTATCACCAACGCCGGCGCGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS006G05-           TAAATCCCTGATTTACGTGCTAAAAACCGGCACGGAGACGTCGAAACAAAACGCCGCGTG
                      ____________________________________________________________
consensus             TAAATCCCTGATTTACGTGCTAAAAACCGGCACGGAGACGTCGAAACAAAACGCCGCGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS006G05-           TGCTCTCCTGAGCTTAGCTTTGTTAGACGAGAATAAGCTCTCAATCGGCGCCTGCGGGGC
                      ____________________________________________________________
consensus             TGCTCTCCTGAGCTTAGCTTTGTTAGACGAGAATAAGCTCTCAATCGGCGCCTGCGGGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS006G05-           TATTCCGCCATTGGTGGCTCTGCTCGTAAGCGGGTCGAATCGGGGAAAGAAAGACGCTTT
                      ____________________________________________________________
consensus             TATTCCGCCATTGGTGGCTCTGCTCGTAAGCGGGTCGAATCGGGGAAAGAAAGACGCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS006G05-           AACCACGCTGTATAAGCTCTGTTCGGTGAAACTGAATAAGGGGAGGGCGGTAACCGCCGG
rJMFF028O06+                                          TGAATAAGGGGAGGGCGGTAACCGCCGG
                      ____________________________________________________________
consensus             AACCACGCTGTATAAGCTCTGTTCGGTGAAACTGAATAAGGGGAGGGCGGTAACCGCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS006G05-           CGCTGTGAAGCCGCTTGTGGGGCTGGTGGGAGAGCAGGGGACTGGGCTGGCAGAGAAGGC
rJMFF028O06+          CGCTGTGAAGCCGCTTGTGGGGCTGGTGGGAGAGCAGGGGACTGGGCTGGCAGAGAAGGC
rJMSF050P12+                                      GGAGANCAGGGGACTGGGCTGCCAGAGAAGGC
                      ____________________________________________________________
consensus             CGCTGTGAAGCCGCTTGTGGGGCTGGTGGGAGAGCAGGGGACTGGGCTGGCAGAGAAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS006G05-           TATGGTGGTGCTTAGCAGCTTGGCTGGGATCCAAAGTGGCCAAGATGCTATTGTGNGAGG
rJMFF028O06+          TATGGTGGTGCTTAGCAGCTTGGCTGGGATCCAAAGTGGCCAAGATGCTATTGTGGAAGG
rJMSF050P12+          TATGGTGGTGCTTAGCAGCTTGGCTGGGATCCAAAGTGGCCAAGATGCTATTGTGGAAGG
                      ____________________________________________________________
consensus             TATGGTGGTGCTTAGCAGCTTGGCTGGGATCCAAAGTGGCCAAGATGCTATTGTGGAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS006G05-           GGGAGGAATTGAAGCCCTAGTGGAGG                                  
rJMFF028O06+          GGGAGGAATTGAAGCCCTAGTGGAGGCCATTGAGGATGGCTCTGATAAGGGAAAGGAATT
rJMSF050P12+          GGGAGGAATTGAAGCCCTAGTGGAGGCCATTGAGGATGGCTCTGATAAGGGAAAGGAATT
                      ____________________________________________________________
consensus             GGGAGGAATTGAAGCCCTAGTGGAGGCCATTGAGGATGGCTCTGATAAGGGAAAGGAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028O06+          TGCAGTCTTGACGCTTTCCCAGTTGTGTTCGGATAGTGTTAGGAACAGGGCAATGCTTGT
rJMSF050P12+          TGCAGTCTTGACGCTTTCCCAGTTGTGTTCGGATAGTGTTAGGAACAGGGCAATGCTTGT
                      ____________________________________________________________
consensus             TGCAGTCTTGACGCTTTCCCAGTTGTGTTCGGATAGTGTTAGGAACAGGGCAATGCTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028O06+          CAGGGAAGGTGGGATTCCTCCCCTTGTTGCCTTGTCTCAGACTGGAACTGCTAAAGCTAA
rJMSF050P12+          CAGGGAAGGTGGGATTCCTCCCCTTGTTGCCTTGTCTCAGACTGGAACTGCTAAAGCTAA
                      ____________________________________________________________
consensus             CAGGGAAGGTGGGATTCCTCCCCTTGTTGCCTTGTCTCAGACTGGAACTGCTAAAGCTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028O06+          GCACAAGGCTGAAACACTTCTCCAACGCTTGAGAGAGCCAAGGCAGGAATCTTCTACATC
rJMSF050P12+          GCACAAGGCTGAAACACTTCTCCAACGCTTGAGAGAGCCAAGGCAGGAATCTTCTACATC
                      ____________________________________________________________
consensus             GCACAAGGCTGAAACACTTCTCCAACGCTTGAGAGAGCCAAGGCAGGAATCTTCTACATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028O06+          GACTCCTTAAAGAGGTAGTTTAGATGGTCGTCTAATGTATTTTAAAGTGGTTTGTTGTAC
rJMSF050P12+          GACTCCTTAAAGAGGTAGTTTAGATGGTCGTCTAATGTATTTTAAAGTGGTTTGTTGTAC
                      ____________________________________________________________
consensus             GACTCCTTAAAGAGGTAGTTTAGATGGTCGTCTAATGTATTTTAAAGTGGTTTGTTGTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028O06+          ATAGGATGTGTTTGTTGAGTTTGTATAGAGTGGTTGAGAAAATTGGATGACAGTACAGAG
rJMSF050P12+          ATAGGATGTGTTTGTTGAGTTTGTATAGAGTGGTTGAGAAAATTGGATGACAGTACAGAG
                      ____________________________________________________________
consensus             ATAGGATGTGTTTGTTGAGTTTGTATAGAGTGGTTGAGAAAATTGGATGACAGTACAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028O06+          GTGTGGAAATAAAGAGAATAGATAGGATGTAGTGATGAAAGAAAGCTGACTTTATAGGTG
rJMSF050P12+          GTGTGGAAATAAAGAGAATAGATAGGATGTAGTGATGAAAGAAAGCTGACTTTATAGGTG
                      ____________________________________________________________
consensus             GTGTGGAAATAAAGAGAATAGATAGGATGTAGTGATGAAAGAAAGCTGACTTTATAGGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028O06+          TATTATTATTGGATTAGGTTTTTAGAGGGGGTTTCGTTTCTCCCTTT             
rJMSF050P12+          TATTATTATTGGATTAGGTTTTTAGAGGGGGTTTCGTTTCTCCCTTTTAACCGATATATC
                      ____________________________________________________________
consensus             TATTATTATTGGATTAGGTTTTTAGAGGGGGTTTCGTTTCTCCCTTTTAACCGATATATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050P12+          GGACTAGAGCTTGTTTTTCCTGGATTTGTTTTTGGGTTTCGGTGAGAGCATTTGGATATA
                      ____________________________________________________________
consensus             GGACTAGAGCTTGTTTTTCCTGGATTTGTTTTTGGGTTTCGGTGAGAGCATTTGGATATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050P12+          TATATGTGGGAGGGCAACATTCGGGATTGCTAGTTATATATGTCTGATTTTAGCGTGTAA
                      ____________________________________________________________
consensus             TATATGTGGGAGGGCAACATTCGGGATTGCTAGTTATATATGTCTGATTTTAGCGTGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050P12+          AGAAACTAGCTTGGTGGGTTATTCCTTGTGTTTGAGTTATGAATAATGTATGGAATATGT
                      ____________________________________________________________
consensus             AGAAACTAGCTTGGTGGGTTATTCCTTGTGTTTGAGTTATGAATAATGTATGGAATATGT