Contig 014121:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF050A02Sequence666014121 (2)690014121 (2)

Alignment

This contig is upended


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JMSF050A02-                                                            GGTACGTATGC
                      ____________________________________________________________
consensus                                                              GGTACGTATGC
 
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JMSF050A02-           TTCAATTCATTCTTAATTTCTTCATCCTTACCTCATTTATTAAGGATAGCTAGTATAGAT
                      ____________________________________________________________
consensus             TTCAATTCATTCTTAATTTCTTCATCCTTACCTCATTTATTAAGGATAGCTAGTATAGAT
 
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JMSF050A02-           ACAATATTATCTTCAATTCTCTGGAAATGTTTCACCTAATTTGGCTGCCACTTACTAACA
                      ____________________________________________________________
consensus             ACAATATTATCTTCAATTCTCTGGAAATGTTTCACCTAATTTGGCTGCCACTTACTAACA
 
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JMSF050A02-           ATACATATTTTCATAATTTAATTTCTTCAATTCCATACAAATTACTATTCAATTCCTTCT
                      ____________________________________________________________
consensus             ATACATATTTTCATAATTTAATTTCTTCAATTCCATACAAATTACTATTCAATTCCTTCT
 
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JMSF050A02-           CTCCATGCACTAAAAGCTAAGCTAGCTAGGGGATATATAATTAATGATATAAAATGGAAA
                      ____________________________________________________________
consensus             CTCCATGCACTAAAAGCTAAGCTAGCTAGGGGATATATAATTAATGATATAAAATGGAAA
 
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JMSF050A02-           TTAAGTATATTTGGTTTAGATAGATATATAGTTGGTTTCGATCATGATATGATCAGTGGA
                      ____________________________________________________________
consensus             TTAAGTATATTTGGTTTAGATAGATATATAGTTGGTTTCGATCATGATATGATCAGTGGA
 
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JMSF050A02-           AAAGTTTGTGTTGAAATTCTTAAAGTTAATTAAGGTAAGAGAATTATATATATATATTTG
                      ____________________________________________________________
consensus             AAAGTTTGTGTTGAAATTCTTAAAGTTAATTAAGGTAAGAGAATTATATATATATATTTG
 
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JMSF050A02-           AGAAATGGGGAAGGAAGCAAAGGAAGGTGATTTCATTTGGATTGATGTGAGTAGAATCTC
                      ____________________________________________________________
consensus             AGAAATGGGGAAGGAAGCAAAGGAAGGTGATTTCATTTGGATTGATGTGAGTAGAATCTC
 
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JMSF050A02-           TAGTGCAGCTACTACCATAATTTTATCCGATCCATTATTAGAAGAGAATCTAAGTTTTTG
                      ____________________________________________________________
consensus             TAGTGCAGCTACTACCATAATTTTATCCGATCCATTATTAGAAGAGAATCTAAGTTTTTG
 
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JMSF050A02-           ATACCATAATAGTTTATTTCGACATTTTTGTGCAATGCAAATACTTAAAAAGTTGCATAT
                      ____________________________________________________________
consensus             ATACCATAATAGTTTATTTCGACATTTTTGTGCAATGCAAATACTTAAAAAGTTGCATAT
 
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JMSF050A02-           ATATATTTCTTCAGGTTCAATTGTATAGTTATCAAACTTTTTTGGGGGAATCAGAGCAAG
rJMSF050A02+                                                     GGGGGAATCAGAGCAAG
                      ____________________________________________________________
consensus             ATATATTTCTTCAGGTTCAATTGTATAGTTATCAAACTTTTTTGGGGGAATCAGAGCAAG
 
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JMSF050A02-           TGAATTTCTAGATTTTTTCTTACATCAACGTTACATTAGATTTTAGCAATACTTT     
rJMSF050A02+          NGAATTTCTAGATTTTTTNNTACATCAACGTTACATTAGATNTTAGCAATACTTTAGGCG
                      ____________________________________________________________
consensus             TGAATTTCTAGATTTTTTCTTACATCAACGTTACATTAGATTTTAGCAATACTTTAGGCG
 
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rJMSF050A02+          AGAGACGAAAATGGCCATTACTCAAGGACTAAAGACCTTTTNGTATACAAATAATATNGT
                      ____________________________________________________________
consensus             AGAGACGAAAATGGCCATTACTCAAGGACTAAAGACCTTTTNGTATACAAATAATATNGT
 
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rJMSF050A02+          AATGGCAGCAGATTAGAGGCAATTGAAACACTAATTAATCTTAAGAATATTTGAGTTAGA
                      ____________________________________________________________
consensus             AATGGCAGCAGATTAGAGGCAATTGAAACACTAATTAATCTTAAGAATATTTGAGTTAGA
 
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rJMSF050A02+          AAAAGTTTAGATCCTGTGCTAATTACACCTCCGAACTTTACCTGAGAAGTTAATTAAGCT
                      ____________________________________________________________
consensus             AAAAGTTTAGATCCTGTGCTAATTACACCTCCGAACTTTACCTGAGAAGTTAATTAAGCT
 
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rJMSF050A02+          CTCGAACTTTTGAAAGTTGCAATTAAGGGTTGGTCGCGTTCTCCGACGACTAGAGATGGC
                      ____________________________________________________________
consensus             CTCGAACTTTTGAAAGTTGCAATTAAGGGTTGGTCGCGTTCTCCGACGACTAGAGATGGC
 
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rJMSF050A02+          GACCAAACTGGTCGCCATCTCCAATCGGGTTGGTCGTCTTCTCTGTCGTTGGAGTAGTCG
                      ____________________________________________________________
consensus             GACCAAACTGGTCGCCATCTCCAATCGGGTTGGTCGTCTTCTCTGTCGTTGGAGTAGTCG
 
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rJMSF050A02+          ACCAGGTTTGGCCGCCATCTCCAAGGTACGGAGTAGGTGACCAACCCTTCTCTGGCGCGT
                      ____________________________________________________________
consensus             ACCAGGTTTGGCCGCCATCTCCAAGGTACGGAGTAGGTGACCAACCCTTCTCTGGCGCGT
 
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rJMSF050A02+          GCTGGTCGGAGTCGTCAGTTTTCGCCACCAGAACATGGCCGGGCAACCTAGTGACCTGTT
                      ____________________________________________________________
consensus             GCTGGTCGGAGTCGTCAGTTTTCGCCACCAGAACATGGCCGGGCAACCTAGTGACCTGTT
 
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rJMSF050A02+          ATTACATGTTACTTACATGTATTTAGGTCTTGATGTACTAAAATGACATGTTTATGTACC
                      ____________________________________________________________
consensus             ATTACATGTTACTTACATGTATTTAGGTCTTGATGTACTAAAATGACATGTTTATGTACC
 
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rJMSF050A02+          TAATTGTACTTTCAAAAGTTTAGGGGCTTAATTGACCTCTCAAGTAAAAATGTATTGACC
                      ____________________________________________________________
consensus             TAATTGTACTTTCAAAAGTTTAGGGGCTTAATTGACCTCTCAAGTAAAAATGTATTGACC