| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF027L03 | Sequence | 640 | 014117 (8) | ref|XP_006344806.1| | 334 | PREDICTED: uncharacterized protein LOC102593443 [Solanum tuberosum] | 738 | 014117 (8) | ref|XP_009615873.1| | 322 | PREDICTED: uncharacterized protein LOC104108517 [Nicotiana tomentosiformis] ref| |
| JMSF027O05 | Sequence | 658 | 014117 (8) | ref|XP_006344806.1| | 323 | PREDICTED: uncharacterized protein LOC102593443 [Solanum tuberosum] | 744 | 014117 (8) | ref|XP_009615873.1| | 378 | PREDICTED: uncharacterized protein LOC104108517 [Nicotiana tomentosiformis] ref| |
| JMSF045L22 | Sequence | 767 | 014117 (8) | ref|XP_006344806.1| | 327 | PREDICTED: uncharacterized protein LOC102593443 [Solanum tuberosum] | 699 | 014117 (8) | ref|XP_009615873.1| | 350 | PREDICTED: uncharacterized protein LOC104108517 [Nicotiana tomentosiformis] ref| |
| JMSF046L22 | Sequence | 349 | 014117 (8) | ref|XP_009615873.1| | 170 | PREDICTED: uncharacterized protein LOC104108517 [Nicotiana tomentosiformis] ref| | |||||
| JMSF048C24 | Sequence | 661 | 022250 | ref|XP_009626354.1| | 4e-31 | PREDICTED: putative E3 ubiquitin-protein ligase RING1a isoform X2 [Nicotiana to | 554 | 014117 (8) | emb|CDP15214.1| | 3e-86 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF045L22- GGGCACTGCCTGTCTTTGCTGTCTACTTATCCGAATTTTCTTTTTCCTTCT
____________________________________________________________
consensus GGGCACTGCCTGTCTTTGCTGTCTACTTATCCGAATTTTCTTTTTCCTTCT
. : . : . : . : . : . :
JMSF045L22- AATCTCATCTACAAGGACACTCAAATCAGCGTCTTAGTCCACAGACTTTGATCAATTTTT
____________________________________________________________
consensus AATCTCATCTACAAGGACACTCAAATCAGCGTCTTAGTCCACAGACTTTGATCAATTTTT
. : . : . : . : . : . :
JMSF045L22- GTAGATAACACTGGTGGCTGAGTCATTCTTCATTGTCGCTTTCTTGAAGCTTTGAGACAG
____________________________________________________________
consensus GTAGATAACACTGGTGGCTGAGTCATTCTTCATTGTCGCTTTCTTGAAGCTTTGAGACAG
. : . : . : . : . : . :
JMSF046L22- TGAATTACCCTGTGACTGGTAATANATGGGGTC
JMSF045L22- TTCTTGCATTTGATGCTTTGGCTTTGGTGAATTACCCTGTGACTGGTAATAGATGGGGTC
____________________________________________________________
consensus TTCTTGCATTTGATGCTTTGGCTTTGGTGAATTACCCTGTGACTGGTAATAGATGGGGTC
. : . : . : . : . : . :
JMSF046L22- TGAAGGGCCGTCTCCTGTAACTATCCATATTACTGGTTTTAAGAAATTTCATGGAGTGGC
JMSF045L22- TGAAGGGCCGTCTCCTGTAACTATCCATATTACTGGTTTTAAGAAATTTCATGGAGTGGC
JMSF027L03- TTACTGGTTTTAAGAAATTTCATGGAGTGGC
JMSF027O05- TTACTGGTTTTAAGAAATTTCATGGAGTGGC
rJMSF027O05+ TGAAGGGCCGTCTCCTGTAACTATCCATATTACTGGTTTTAAGAAATTTCATGGAGTGGC
rJMSF045L22+ TTTCATGGAGTGGC
____________________________________________________________
consensus TGAAGGGCCGTCTCCTGTAACTATCCATATTACTGGTTTTAAGAAATTTCATGGAGTGGC
. : . : . : . : . : . :
JMSF046L22- GGAGAATCCAACCGAAATAATTGTAAGTAATCTTCAAGATTATATGAAGAAAAAGGGTAC
JMSF045L22- GGAGAATCCAACCGAAATAATTGTAAGTAATCTTCAAGATTATATGAAGAAAAAGGGTAC
JMSF027L03- GGAGAATCCAACCGAAATAATTGTAAGTAATCTTCAAGATTATATGAAGAAAAAGGGTAC
JMSF027O05- GGAGAATCCAACCGAAATAATTGTAAGTAATCTTCAAGATTATATGAAGAAAAAGGGTAC
rJMSF027O05+ GGAGAATCCAACCGAAATAATTGTAAGTAATCTTCAAGATTATATGAAGAAAAAGGGTAC
rJMSF045L22+ GGAGAATCCAACCGAAATAATTGTAAGTAATCTTCAAGATTATATGAAGAAAAAGGGTAC
rJMSF027L03+ CTTCAAGATTATATGAAGAAAAAGGGTAC
____________________________________________________________
consensus GGAGAATCCAACCGAAATAATTGTAAGTAATCTTCAAGATTATATGAAGAAAAAGGGTAC
. : . : . : . : . : . :
JMSF046L22- TCCCAAAGGGCTTATCCTCGGGAGTTGCANTGTTCTTGAGACTGCGGGCCAGGGAGCACT
JMSF045L22- TCCCAAAGGGCTTATCCTCGGGAGTTGCAGTGTTCTTGAGACTGCGGGCCAGGGAGCACT
JMSF027L03- TCCCAAAGGGCTTATCCTCGGGAGTTGCAGTGTTCTTGAGACTGCGGGCCAGGGAGCACT
JMSF027O05- TCCCAAAGGGCTTATCCTCGGGAGTTGCAGTGTTCTTGAGACTGCGGGCCAGGGAGCACT
rJMSF027O05+ TCCCAAAGGGCTTATCCTCGGGAGTTGCAGTGTTCTTGAGACTGCGGGCCAGGGAGCACT
rJMSF045L22+ TCCCAAAGGGCTTATCCTCGGGAGTTGCAGTGTTCTTGAGACTGCGGGCCAGGGAGCACT
rJMSF027L03+ TCCCAAAGGGCTTATCCTCGGGAGTTGCAGTGTTCTTGAGACTGCGGGCCAGGGAGCACT
rJMSF048C24+ GGAGCACT
____________________________________________________________
consensus TCCCAAAGGGCTTATCCTCGGGAGTTGCAGTGTTCTTGAGACTGCGGGCCAGGGAGCACT
. : . : . : . : . : . :
JMSF046L22- GGTTCCTCTATATCANACATTACAGTCTGCTCTGAGAAATGATGAATCTGANTCGTCACA
JMSF045L22- GGTTCCTCTATATCAGACATTACAGTCTGCTCTGAGAAATGATGAATCTGAGTCGTCACA
JMSF027L03- GGTTCCTCTATATCAGACATTACAGTCTGCTCTGAGAAATGATGAATCTGAGTCGTCACA
JMSF027O05- GGTTCCTCTATATCAGACATTACAGTCTGCTCTGAGAAATGATGAATCTGAGTCGTCACA
rJMSF027O05+ GGTTCCTCTATATCAGACATTACAGTCTGCTCTGAGAAATGATGAATCTGAGTCGTCACA
rJMSF045L22+ GGTTCCTCTATATCAGACATTACAGTCTGCTCTGAGAAATGATGAATCTGAGTCGTCACA
rJMSF027L03+ GGTTCCTCTATATCAGACATTACAGTCTGCTCTGAGAAATGATGAATCTGAGTCGTCACA
rJMSF048C24+ GGTTCCTCTATATCAGACATTACAGTCTGCTCTGAGAAATGATGAATCTGAGTCGTCACA
____________________________________________________________
consensus GGTTCCTCTATATCAGACATTACAGTCTGCTCTGAGAAATGATGAATCTGAGTCGTCACA
. : . : . : . : . : . :
JMSF046L22- TTCCNNGANAGTTATTTGGTTGCACTTTGGAGTTAATANTGGGGCCACNNAGTTTGCCNT
JMSF045L22- TTCCAGGAGAGTTATTTGGTTGCACTTTGGAGTTAATAGTGGGGCCACAAAGTTTGCCAT
JMSF027L03- TTCCAGGAGAGTTATTTGGTTGCACTTTGGAGTTAATAGTGGGGCCACAAAGTTTGCCAT
JMSF027O05- TTCCAGGAGAGTTATTTGGTTGCACTTTGGAGTTAATAGTGGGGCCACAAAGTTTGCCAT
rJMSF027O05+ TTCCAGGAGAGTTATTTGGTTGCACTTTGGAGTTAATAGTGGGGCCACAAAGTTTGCCAT
rJMSF045L22+ TTCCAGGAGAGTTATTTGGTTGCACTTTGGAGTTAATAGTGGGGCCACAAAGTTTGCCAT
rJMSF027L03+ TTCCAGGAGAGTTATTTGGTTGCACTTTGGAGTTAATAGTGGGGCCACAAAGTTTGCCAT
rJMSF048C24+ TTCCAGGAGAGTTATTNGGNTGCACTTTGGAGTTAATAGTGGGGCCACAAAGTTTGCCAT
____________________________________________________________
consensus TTCCAGGAGAGTTATTTGGTTGCACTTTGGAGTTAATAGTGGGGCCACAAAGTTTGCCAT
. : . : . : . : . : . :
JMSF046L22- ANAGCGCCNAGCTG
JMSF045L22- AGAGCGCCAAGCTGTCAACGAAGCTACCTTCCGATGTGCAGATGAGATGGGATGGAAGCC
JMSF027L03- AGAGCGCCAAGCTGTCAACGAAGCTACCTTCCGATGTGCAGATGAGATGGGATGGAAGCC
JMSF027O05- AGAGCGCCAAGCTGTCAACGAAGCTACCTTCCGATGTGCAGATGAGATGGGATGGAAGCC
rJMSF027O05+ AGAGCGCCAAGCTGTCAACGAAGCTACCTTCCGATGTGCAGATGAGATGGGATGGAAGCC
rJMSF045L22+ AGAGCGCCAAGCTGTCAACGAAGCTACCTTCCGATGTGCAGATGAGATGGGATGGAAGCC
rJMSF027L03+ AGAGCGCCAAGCTGTCAACGAAGCTACCTTCCGATGTGCAGATGAGATGGGATGGAAGCC
rJMSF048C24+ AGAGCGCCAAGCTGTCAACGAAGCTACCTTCCGATGTGCAGATGAGATGGGANGGAAGCC
____________________________________________________________
consensus AGAGCGCCAAGCTGTCAACGAAGCTACCTTCCGATGTGCAGATGAGATGGGATGGAAGCC
. : . : . : . : . : . :
JMSF045L22- ACAGAAAATTCCCATAGTTCCCATGGATGGTGCAATTTCACGAATAAGAGAGACTTCTTT
JMSF027L03- ACAGAAAATTCCCATAGTTCCCATGGATGGTGCAATTTCACGAATAAGAGAGACTTCTTT
JMSF027O05- ACAGAAAATTCCCATAGTTCCCATGGATGGTGCAATTTCACGAATAAGAGAGACTTCTTT
rJMSF027O05+ ACAGAAAATTCCCATAGTTCCCATGGATGGTGCAATTTCACGAATAAGAGAGACTTCTTT
rJMSF045L22+ ACAGAAAATTCCCATAGTTCCCATGGATGGTGCAATTTCACGAATAAGAGAGACTTCTTT
rJMSF027L03+ ACAGAAAATTCCCATAGTTCCCATGGATGGTGCAATTTCACGAATAAGAGAGACTTCTTT
rJMSF048C24+ ACAGAAAATTCCCATAGTTCCCATGGATGGTGCAATTTCACGAATAAGAGAGACTTCTTT
____________________________________________________________
consensus ACAGAAAATTCCCATAGTTCCCATGGATGGTGCAATTTCACGAATAAGAGAGACTTCTTT
. : . : . : . : . : . :
JMSF045L22- TCCTGTCGAGGAGATCACCAAAGCATTGGCAATGACGGGCTATGAAGTGACGACCTCCAA
JMSF027L03- TCCTGTCGAGGAGATCACCAAAGCATTGGCAATGACGGGCTATGAAGTGACGACCTCCAA
JMSF027O05- TCCTGTCGAGGAGATCACCAAAGCATTGGCAATGACGGGCTATGAAGTGACGACCTCCAA
rJMSF027O05+ TCCTGTCGAGGAGATCACCAAAGCATTGGCAATGACGGGCTATGAAGTGACGACCTCCAA
rJMSF045L22+ TCCTGTCGAGGAGATCACCAAAGCATTGGCAATGACGGGCTATGAAGTGACGACCTCCAA
rJMSF027L03+ TCCTGTCGAGGAGATCACCAAAGCATTGGCAATGACGGGCTATGAAGTGACGACCTCCAA
rJMSF048C24+ TCCTGTCGAGGAGATCACCAAAGCATTGNCAATGACGGGNTATGAAGTGACGACCTCCAN
____________________________________________________________
consensus TCCTGTCGAGGAGATCACCAAAGCATTGGCAATGACGGGCTATGAAGTGACGACCTCCAA
. : . : . : . : . : . :
JMSF045L22- CGATGCAGGCCGGTTTGTATGCAACTATGTTTACTATCATTCGTTGCGCTTTGCGG
JMSF027L03- CGATGCAGGCCGGTTTGTATGCAACTATGTTTACTATCATTCGTTGCGCTTTGCGGAGCA
JMSF027O05- CGATGCAGGCCGGTTTGTATGCAACTATGTTTACTATCATTCGTTGCGC
rJMSF027O05+ CGATGCAGGCCGGTTTGTATGCAACTATGTTTACTATCATTCGTTGCGCTTTGCGGAGCA
rJMSF045L22+ CGATGCAGGCCGGTTTGTATGCAACTATGTTTACTATCATTCGTTGCGCTTTGCGGAGCA
rJMSF027L03+ CGATGCAGGCCGGTTTGTATGCAACTATGTTTACTATCATTCGTTGCGCTTTGCGGAGCA
rJMSF048C24+ CGATGCAGGCCGGTTTGTATGCAACTATGTTTACTATCATTCGTTGCGCTTTGCGGAGCA
____________________________________________________________
consensus CGATGCAGGCCGGTTTGTATGCAACTATGTTTACTATCATTCGTTGCGCTTTGCGGAGCA
. : . : . : . : . : . :
JMSF027L03- GTATGGAATA
rJMSF027O05+ GTATGGAATAAAATCACTATTTGTACATGTCCCTCTCTTCACAACAATAGATGAGGAGAC
rJMSF045L22+ GTATGGAATAAAATCACTATTTGTACATGTCCCTCTCTTCACAACAATAGATGAGGAGAC
rJMSF027L03+ GTATGGAATAAAATCACTATTTGTACATGTCCCTCTCTTCACAACAATAGATGAGGAGAC
rJMSF048C24+ GTATGGAATAAAATCACTATTTGTACATGTCCCTCTCTTCACAACAATAGATGAGGAGAC
____________________________________________________________
consensus GTATGGAATAAAATCACTATTTGTACATGTCCCTCTCTTCACAACAATAGATGAGGAGAC
. : . : . : . : . : . :
rJMSF027O05+ CCAAATGCAGTTTGCTGCCTATTTGTTAGAGGTACTTGCCT
rJMSF045L22+ CCAAATGCAGTTTGCTGCCTATTTGTTAGAGGTACTTGCCT
rJMSF027L03+ CCAAATGCAGTTTGCTGCCTATTTGTTAGAGGTACTTGCCT
rJMSF048C24+ CCAAATGCAGTTTGCTGCCTATTTGTTAGAGGTACTTGCCTTAGTATCCTAGTTTCTCNN
____________________________________________________________
consensus CCAAATGCAGTTTGCTGCCTATTTGTTAGAGGTACTTGCCTTAGTATCCTAGTTTCTCNN
. : . : . : . : . : . :
rJMSF048C24+ CAGTGGTTTGTGTCTTNTAAGTTATATCCAGTGTGGAAGTGCATTTCTCCTTNTGTTGTA
____________________________________________________________
consensus CAGTGGTTTGTGTCTTNTAAGTTATATCCAGTGTGGAAGTGCATTTCTCCTTNTGTTGTA