Contig 014116:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006I19Sequence546010016 (7)ref|XP_004244294.1|8e-67PREDICTED: B-box zinc finger protein 22 isoform X3 [Solanum lycopersicum]692014116 (2)
JMSF047O24Sequence632010016 (7)emb|CDP06052.1|4e-84unnamed protein product [Coffea canephora]610014116 (2)

Alignment

This contig is upended


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rJMFF006I19+                  TGTGTCACGAAGTGTTGCCTTACTGCATGTAGAAATCGTTGAGCTTATCTTT
                      ____________________________________________________________
consensus                     TGTGTCACGAAGTGTTGCCTTACTGCATGTAGAAATCGTTGAGCTTATCTTT
 
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rJMFF006I19+          GGCTTGGGAAAGTTAACTTCCCACTCTGTCTGTAAGTATCCATCGGCTCTTTCTCATCAC
rJMSF047O24+                                                            TTCTCATCAC
                      ____________________________________________________________
consensus             GGCTTGGGAAAGTTAACTTCCCACTCTGTCTGTAAGTATCCATCGGCTCTTTCTCATCAC
 
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rJMFF006I19+          ACTAGTATGAAGGATCATGAAACTAAGCACAGAGGATTTATTGCAACTCTTGTGCTACTT
rJMSF047O24+          ACTAGTATGAAGGATCATGAAACTAAGCACAGAGGATTTATTGCAACTCTTGTGCTACTT
                      ____________________________________________________________
consensus             ACTAGTATGAAGGATCATGAAACTAAGCACAGAGGATTTATTGCAACTCTTGTGCTACTT
 
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rJMFF006I19+          GTGCTAAATAAATGCCACGAGGACCCTACTTTTCTTGTCTTGGCAGTTGACAGACAATGA
rJMSF047O24+          GTGCTAAATAAATGCCACGAGGACCCTACTTTTCTTGTCTTGGCAGTTGACAGACAATGA
                      ____________________________________________________________
consensus             GTGCTAAATAAATGCCACGAGGACCCTACTTTTCTTGTCTTGGCAGTTGACAGACAATGA
 
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rJMFF006I19+          TGGTCCGAGCTTCAAGCAACATGCAAGTATTGAATGATTATATTGTACAAAGCGAAAGCA
rJMSF047O24+          TGGTCCGAGCTTCAAGCAACATGCAAGTATTGAATGATTATATTGTACAAAGCGAAAGCA
                      ____________________________________________________________
consensus             TGGTCCGAGCTTCAAGCAACATGCAAGTATTGAATGATTATATTGTACAAAGCGAAAGCA
 
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rJMFF006I19+          GCAGATGATTTGTTAGCGGATAACATGAATGGATGATGCAGTGTTTACCTCTTGATCTTG
rJMSF047O24+          GCAGATGATTTGTTAGCGGATAACATGAATGGATGATGCAGTGTTTACCTCTTGATCTTG
                      ____________________________________________________________
consensus             GCAGATGATTTGTTAGCGGATAACATGAATGGATGATGCAGTGTTTACCTCTTGATCTTG
 
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rJMFF006I19+          CTGGATAATGCATGCCGACAAGAGAAGTGAACCATATTCTCTCTGGGCACACCTGATAAA
rJMSF047O24+          CTGGATAATGCATGCCGACAAGAGAAGTGAACCATATTCTCTCTGGGCACACCTGATAAA
                      ____________________________________________________________
consensus             CTGGATAATGCATGCCGACAAGAGAAGTGAACCATATTCTCTCTGGGCACACCTGATAAA
 
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rJMFF006I19+          GATGTTGACACATAACATGAGGAGATAGCATCAGTCCGCAAGATCATATGATCAACGAAT
rJMSF047O24+          GATGTTGACACATAACATGAGGAGATAGCATCAGTCCGCAAGATCATATGATCAACGAAT
                      ____________________________________________________________
consensus             GATGTTGACACATAACATGAGGAGATAGCATCAGTCCGCAAGATCATATGATCAACGAAT
 
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rJMFF006I19+          GATTGTAATGCATGAATCATTCAATCATTTGGATTTGTTTTTTTTTGTTATCAGATGCAG
rJMSF047O24+          GATTGTAATGCACGAATCATTCAATCATTTGGATTTGTTTTTTTTTGTTATCAGATGCAG
                      ____________________________________________________________
consensus             GATTGTAATGCATGAATCATTCAATCATTTGGATTTGTTTTTTTTTGTTATCAGATGCAG
 
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rJMFF006I19+          CTGGGAGTGTCTATTCCTGCTGGACGTGGATAAGGATAGATGCCAGATATGGACAAGAGC
rJMSF047O24+          CTGGGAGTGTCTATTCCTGCTGGACGTGGATAAGGATAGATGCCAGATATGGACAAGAGC
                      ____________________________________________________________
consensus             CTGGGAGTGTCTATTCCTGCTGGACGTGGATAAGGATAGATGCCAGATATGGACAAGAGC
 
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rJMFF006I19+          AAATGAAAAATTTTCTCTGTATGTAATAGCCTGAGAAGATGTTTGATAGATTTCTCGTTT
rJMSF047O24+          AAATGAAAAATTTTCTCTGTATGTAATAGCCTGAGAAGATGTTTGATAGATTTCTCGTTT
                      ____________________________________________________________
consensus             AAATGAAAAATTTTCTCTGTATGTAATAGCCTGAGAAGATGTTTGATAGATTTCTCGTTT
 
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rJMFF006I19+          GTTGCTAACTCGTTGTCCATGATGTTAGATGTGTATCTGA                    
rJMSF047O24+          GTTGCTAACTCGTTGTCCATGATGTTAGATGTGTATCTGATATCTCCATGATATTATGTT
                      ____________________________________________________________
consensus             GTTGCTAACTCGTTGTCCATGATGTTAGATGTGTATCTGATATCTCCATGATATTATGTT