Contig 014115:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029B02Sequence676009392 (4)ref|XP_006359790.1|1e-57PREDICTED: putative late blight resistance protein homolog R1B-17-like [Solanum735014115 (2)ref|XP_011070823.1|5e-50PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi
JMSF047K02Sequence687009392 (4)ref|XP_004238948.1|5e-71PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lyco759014115 (2)ref|XP_011070823.1|4e-50PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF029B02+ CCTACAANTCCCATCGAAG
rJMSF047K02+ AANTAAGGGNCTTCCCCAGGCCTACAAATCCCATCGAAG
                      ____________________________________________________________
consensus AANTAAGGGNCTTCCCCAGGCCTACAAATCCCATCGAAG
 
. : . : . : . : . : . :
rJMSF029B02+ CTGAAGAAGCTCACGATATCAAACACTTCTCTTGAATGGAAGGATATGACAATATTAGGA
rJMSF047K02+ CTGAAGAAGCTCACGATATCAAACACTTCTCTTGAATGGAAGGATATGACAATATTAGGA
                      ____________________________________________________________
consensus CTGAAGAAGCTCACGATATCAAACACTTCTCTTGAATGGAAGGATATGACAATATTAGGA
 
. : . : . : . : . : . :
rJMSF029B02+ ACCTTGGAGAACCTTGAAGTCCTCAAGCTGGATGATAACGCGTTTAAGGGAGAAATTTGG
rJMSF047K02+ ACCTTGGAGAACCTTGAAGTCCTCAAGCTGGATGATAACGCGTTTAAGGGAGAAATTTGG
                      ____________________________________________________________
consensus ACCTTGGAGAACCTTGAAGTCCTCAAGCTGGATGATAACGCGTTTAAGGGAGAAATTTGG
 
. : . : . : . : . : . :
rJMSF029B02+ GAGCCAGTGAACGGTGGTTTTCGTCATCTCCAGGTCTTCTGCATTGGAAGGACAGATTTA
rJMSF047K02+ GAGCCAGTGAACGGTGGTTTTCGTCATCTCCAGGTCTTCTGCATTGGAAGGACAGATTTA
                      ____________________________________________________________
consensus GAGCCAGTGAACGGTGGTTTTCGTCATCTCCAGGTCTTCTGCATTGGAAGGACAGATTTA
 
. : . : . : . : . : . :
rJMSF029B02+ GCGTCGTGGCAGGCTTCGAGCCATCACTTCCCGAGGCTAAAGTTTCTTGCACTAAGGCAC
rJMSF047K02+ GCGTCGTGGCAGGCTTCGAGCCATCACTTCCCGAGGCTAAAGTTTCTTGCACTAAGGCAC
                      ____________________________________________________________
consensus GCGTCGTGGCAGGCTTCGAGCCATCACTTCCCGAGGCTAAAGTTTCTTGCACTAAGGCAC
 
. : . : . : . : . : . :
rJMSF029B02+ TGCAATAAACTCGAGGCAGTGCCATTCGGTCTGGCTGATATTCCGAGCCTTCAAATGATG
rJMSF047K02+ TGCAATAAACTCGAGGCAGTGCCATTCGGTCTGGCTGATATTCCGAGCCTTCAAATGATG
                      ____________________________________________________________
consensus TGCAATAAACTCGAGGCAGTGCCATTCGGTCTGGCTGATATTCCGAGCCTTCAAATGATG
 
. : . : . : . : . : . :
rJMSF029B02+ GAGCTTTACTGCACAAACAAAATCGCTGCTGAATCTGCCCGCAAAATACAGCAACACAAG
rJMSF047K02+ GAGCTTTACTGCACAAACAAAATCGCTGCTGAATCTGCCCGCAAAATACAGCAACACAAG
                      ____________________________________________________________
consensus GAGCTTTACTGCACAAACAAAATCGCTGCTGAATCTGCCCGCAAAATACAGCAACACAAG
 
. : . : . : . : . : . :
rJMSF029B02+ CCAAAGAGTGGCGGTTTCAAGCTCTCAATCTATCCTCCCGACCATTGATTCCAACGAACT
rJMSF047K02+ CCAAAGAGTGGCGGTTTCAAGCTCTCAATCTATCCTCCCGACCATTGATTCCAACGAACT
                      ____________________________________________________________
consensus CCAAAGAGTGGCGGTTTCAAGCTCTCAATCTATCCTCCCGACCATTGATTCCAACGAACT
 
. : . : . : . : . : . :
rJMSF029B02+ TAACTGTATCCCCGCGATGGTTCATTGACAGGTAGGGCTGCAAGAAATCGTATTTTCTCA
rJMSF047K02+ TAACTGTATCCCCGCGATGGTTCATTGACAGGTAGGGCTGCAAGAAATCGTATTTTCTCA
                      ____________________________________________________________
consensus TAACTGTATCCCCGCGATGGTTCATTGACAGGTAGGGCTGCAAGAAATCGTATTTTCTCA
 
. : . : . : . : . : . :
rJMSF029B02+ GGGTGTCCATTCCCAACAATCGCTATTTTCCCTTGATTCGCCTCGTGACTTGAAAGAGAT
rJMSF047K02+ GGGTGTCCATTCCCAACAATCGCTATTTTCCCTTGATTCGCCTCGTGACTTGAAAGAGAT
                      ____________________________________________________________
consensus GGGTGTCCATTCCCAACAATCGCTATTTTCCCTTGATTCGCCTCGTGACTTGAAAGAGAT
 
. : . : . : . : . : . :
rJMSF029B02+ GAGACCCTGTGATCACAGAATCTGGAGCTCATGGGGCTTTAATGCAGAGTGTTCTTGTGT
rJMSF047K02+ GAGACCCTGTGATCACAGAATCTGGAGCTCATGGGGCTTTAATGCAGAGTGTTCTTGTGT
                      ____________________________________________________________
consensus GAGACCCTGTGATCACAGAATCTGGAGCTCATGGGGCTTTAATGCAGAGTGTTCTTGTGT
 
. : . : . : . : . : . :
rJMSF029B02+ TTGGAAATATTATTATCATGATTGCAGCTATTTATAACTATGGTTCCTTCATGGATCAAT
rJMSF047K02+ TTGGAAATATTATTATCATGATTGCAGCTATTTATAACTATGGTTCCTTCATGGATCAAT
                      ____________________________________________________________
consensus TTGGAAATATTATTATCATGATTGCAGCTATTTATAACTATGGTTCCTTCATGGATCAAT
 
. : . : . : . : . : . :
rJMSF029B02+ GAGTTATTGTGTGCCCATTTTGAAGTTTTGTCCAATTGGTTTGAAAAACTAT
rJMSF047K02+ GAGTTATTGTGTGCCCATTTTGAAGTTTTGTCCAATTGGTTTGAAAAACTATTGAGTCCA
                      ____________________________________________________________
consensus GAGTTATTGTGTGCCCATTTTGAAGTTTTGTCCAATTGGTTTGAAAAACTATTGAGTCCA