Contig 014115:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029B02Sequence676009392 (4)ref|XP_006359790.1|1e-57PREDICTED: putative late blight resistance protein homolog R1B-17-like [Solanum735014115 (2)ref|XP_011070823.1|5e-50PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi
JMSF047K02Sequence687009392 (4)ref|XP_004238948.1|5e-71PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lyco759014115 (2)ref|XP_011070823.1|4e-50PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi

Alignment

This contig is upended


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rJMSF029B02+                                                   CCTACAANTCCCATCGAAG
rJMSF047K02+                               AANTAAGGGNCTTCCCCAGGCCTACAAATCCCATCGAAG
                      ____________________________________________________________
consensus                                  AANTAAGGGNCTTCCCCAGGCCTACAAATCCCATCGAAG
 
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rJMSF029B02+          CTGAAGAAGCTCACGATATCAAACACTTCTCTTGAATGGAAGGATATGACAATATTAGGA
rJMSF047K02+          CTGAAGAAGCTCACGATATCAAACACTTCTCTTGAATGGAAGGATATGACAATATTAGGA
                      ____________________________________________________________
consensus             CTGAAGAAGCTCACGATATCAAACACTTCTCTTGAATGGAAGGATATGACAATATTAGGA
 
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rJMSF029B02+          ACCTTGGAGAACCTTGAAGTCCTCAAGCTGGATGATAACGCGTTTAAGGGAGAAATTTGG
rJMSF047K02+          ACCTTGGAGAACCTTGAAGTCCTCAAGCTGGATGATAACGCGTTTAAGGGAGAAATTTGG
                      ____________________________________________________________
consensus             ACCTTGGAGAACCTTGAAGTCCTCAAGCTGGATGATAACGCGTTTAAGGGAGAAATTTGG
 
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rJMSF029B02+          GAGCCAGTGAACGGTGGTTTTCGTCATCTCCAGGTCTTCTGCATTGGAAGGACAGATTTA
rJMSF047K02+          GAGCCAGTGAACGGTGGTTTTCGTCATCTCCAGGTCTTCTGCATTGGAAGGACAGATTTA
                      ____________________________________________________________
consensus             GAGCCAGTGAACGGTGGTTTTCGTCATCTCCAGGTCTTCTGCATTGGAAGGACAGATTTA
 
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rJMSF029B02+          GCGTCGTGGCAGGCTTCGAGCCATCACTTCCCGAGGCTAAAGTTTCTTGCACTAAGGCAC
rJMSF047K02+          GCGTCGTGGCAGGCTTCGAGCCATCACTTCCCGAGGCTAAAGTTTCTTGCACTAAGGCAC
                      ____________________________________________________________
consensus             GCGTCGTGGCAGGCTTCGAGCCATCACTTCCCGAGGCTAAAGTTTCTTGCACTAAGGCAC
 
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rJMSF029B02+          TGCAATAAACTCGAGGCAGTGCCATTCGGTCTGGCTGATATTCCGAGCCTTCAAATGATG
rJMSF047K02+          TGCAATAAACTCGAGGCAGTGCCATTCGGTCTGGCTGATATTCCGAGCCTTCAAATGATG
                      ____________________________________________________________
consensus             TGCAATAAACTCGAGGCAGTGCCATTCGGTCTGGCTGATATTCCGAGCCTTCAAATGATG
 
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rJMSF029B02+          GAGCTTTACTGCACAAACAAAATCGCTGCTGAATCTGCCCGCAAAATACAGCAACACAAG
rJMSF047K02+          GAGCTTTACTGCACAAACAAAATCGCTGCTGAATCTGCCCGCAAAATACAGCAACACAAG
                      ____________________________________________________________
consensus             GAGCTTTACTGCACAAACAAAATCGCTGCTGAATCTGCCCGCAAAATACAGCAACACAAG
 
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rJMSF029B02+          CCAAAGAGTGGCGGTTTCAAGCTCTCAATCTATCCTCCCGACCATTGATTCCAACGAACT
rJMSF047K02+          CCAAAGAGTGGCGGTTTCAAGCTCTCAATCTATCCTCCCGACCATTGATTCCAACGAACT
                      ____________________________________________________________
consensus             CCAAAGAGTGGCGGTTTCAAGCTCTCAATCTATCCTCCCGACCATTGATTCCAACGAACT
 
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rJMSF029B02+          TAACTGTATCCCCGCGATGGTTCATTGACAGGTAGGGCTGCAAGAAATCGTATTTTCTCA
rJMSF047K02+          TAACTGTATCCCCGCGATGGTTCATTGACAGGTAGGGCTGCAAGAAATCGTATTTTCTCA
                      ____________________________________________________________
consensus             TAACTGTATCCCCGCGATGGTTCATTGACAGGTAGGGCTGCAAGAAATCGTATTTTCTCA
 
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rJMSF029B02+          GGGTGTCCATTCCCAACAATCGCTATTTTCCCTTGATTCGCCTCGTGACTTGAAAGAGAT
rJMSF047K02+          GGGTGTCCATTCCCAACAATCGCTATTTTCCCTTGATTCGCCTCGTGACTTGAAAGAGAT
                      ____________________________________________________________
consensus             GGGTGTCCATTCCCAACAATCGCTATTTTCCCTTGATTCGCCTCGTGACTTGAAAGAGAT
 
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rJMSF029B02+          GAGACCCTGTGATCACAGAATCTGGAGCTCATGGGGCTTTAATGCAGAGTGTTCTTGTGT
rJMSF047K02+          GAGACCCTGTGATCACAGAATCTGGAGCTCATGGGGCTTTAATGCAGAGTGTTCTTGTGT
                      ____________________________________________________________
consensus             GAGACCCTGTGATCACAGAATCTGGAGCTCATGGGGCTTTAATGCAGAGTGTTCTTGTGT
 
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rJMSF029B02+          TTGGAAATATTATTATCATGATTGCAGCTATTTATAACTATGGTTCCTTCATGGATCAAT
rJMSF047K02+          TTGGAAATATTATTATCATGATTGCAGCTATTTATAACTATGGTTCCTTCATGGATCAAT
                      ____________________________________________________________
consensus             TTGGAAATATTATTATCATGATTGCAGCTATTTATAACTATGGTTCCTTCATGGATCAAT
 
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rJMSF029B02+          GAGTTATTGTGTGCCCATTTTGAAGTTTTGTCCAATTGGTTTGAAAAACTAT        
rJMSF047K02+          GAGTTATTGTGTGCCCATTTTGAAGTTTTGTCCAATTGGTTTGAAAAACTATTGAGTCCA
                      ____________________________________________________________
consensus             GAGTTATTGTGTGCCCATTTTGAAGTTTTGTCCAATTGGTTTGAAAAACTATTGAGTCCA