Contig 014112:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF042I05-                                                                   GGCG
                      ____________________________________________________________
consensus                                                                     GGCG
 
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JMSF042I05-           ATATCACTTCATTTCTGGATTTCTAACAAAACGGAAACTCAAAAACCCTAAACCCTACCC
                      ____________________________________________________________
consensus             ATATCACTTCATTTCTGGATTTCTAACAAAACGGAAACTCAAAAACCCTAAACCCTACCC
 
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JMSF042I05-           CAGTCCTCAGTGTATCAAACTCCTCTTTCCGGCCGTCACCTCCACCGACGTCAGTGATGG
                      ____________________________________________________________
consensus             CAGTCCTCAGTGTATCAAACTCCTCTTTCCGGCCGTCACCTCCACCGACGTCAGTGATGG
 
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JMSF042I05-           CGCTCTGCCACCTCCGCCTGCGCCGCCGCGCCCTCTCTCTCTCTTCGTCGATACTCAACC
                      ____________________________________________________________
consensus             CGCTCTGCCACCTCCGCCTGCGCCGCCGCGCCCTCTCTCTCTCTTCGTCGATACTCAACC
 
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JMSF042I05-           ATCATCTCCACCACTCAAGCCTCATTTCCCCACTCCCTTCGGTCTCTGCTTCGCCTGCTC
                      ____________________________________________________________
consensus             ATCATCTCCACCACTCAAGCCTCATTTCCCCACTCCCTTCGGTCTCTGCTTCGCCTGCTC
 
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JMSF042I05-           TGTCCTCCATTGGTTGCACCTCAAGCTCAAACGTTATCCCTCAATTTCCGTCTCAATCGA
                      ____________________________________________________________
consensus             TGTCCTCCATTGGTTGCACCTCAAGCTCAAACGTTATCCCTCAATTTCCGTCTCAATCGA
 
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JMSF042I05-           GGCTCTTTAGAGCGTCGGCGATCTCATTGTCTTCGAGGTCTCGGTCTTTCGACCGGAATC
                      ____________________________________________________________
consensus             GGCTCTTTAGAGCGTCGGCGATCTCATTGTCTTCGAGGTCTCGGTCTTTCGACCGGAATC
 
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JMSF042I05-           CAGCTGACGAGGAGATCGGCCCCGACACTATCCTCTTTGAAGGATGCGATTACAATCATT
                      ____________________________________________________________
consensus             CAGCTGACGAGGAGATCGGCCCCGACACTATCCTCTTTGAAGGATGCGATTACAATCATT
 
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JMSF042I05-           GGCTGATTACTATTGATTTCCCCAAGGACCCGGCCCCCACCCGCGAGGAAATGATTGAAA
JMSF047H03-                                    GGACCCGGCCCCCACCCGCGAGGAAATGATTGAAA
                      ____________________________________________________________
consensus             GGCTGATTACTATTGATTTCCCCAAGGACCCGGCCCCCACCCGCGAGGAAATGATTGAAA
 
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JMSF042I05-           CATACATTCAGACTGCCGCTAAAGTTTTCGGAAGTGTGGAGGAGGCTAAACAGAAGATTT
JMSF047H03-           CATACATTCAGACTGCCGCTAAAGTTTTCGGAAGTGTGGAGGAGGCTAAACAGAAGATTT
                      ____________________________________________________________
consensus             CATACATTCAGACTGCCGCTAAAGTTTTCGGAAGTGTGGAGGAGGCTAAACAGAAGATTT
 
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JMSF042I05-           ATGCATTAAGCACGACAACTTACCAGGGTTTTCAGGTCCTATGTTCAGAGGAAACATCAG
JMSF047H03-           ATGCATTAAGCACGACAACTTACCAGGGTTTTCAGGTCCTATGTTCAGAGGAAACATCAG
                      ____________________________________________________________
consensus             ATGCATTAAGCACGACAACTTACCAGGGTTTTCAGGTCCTATGTTCAGAGGAAACATCAG
 
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JMSF042I05-           AGAAGTTTAGAGGTCTGCCTGGAGTAGTCTTTATACTACCAGATTCTTATATTGATCCAG
JMSF047H03-           AGAAGTTTAGAGGTCTGCCTGGAGTAGTCTTTATACTACCAGATTCTTATATTGATCCAG
                      ____________________________________________________________
consensus             AGAAGTTTAGAGGTCTGCCTGGAGTAGTCTTTATACTACCAGATTCTTATATTGATCCAG
 
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JMSF042I05-           TAAACAAAGAGTATGGAGGTGACAAGTATATGAATGGAGTGATTATTGAGAGACCTCCAC
JMSF047H03-           TAAACAAAGAGTATGGAGGTGACAAGTATATGAATGGAGTGATTATTGAGAGACCTCCAC
                      ____________________________________________________________
consensus             TAAACAAAGAGTATGGAGGTGACAAGTATATGAATGGAGTGATTATTGAGAGACCTCCAC
 
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JMSF042I05-           CCGTACAGTATGGGAGACAAGGACGTCGAAAT                            
JMSF047H03-           CCGTACAGTATGGGAGACAAGGACGTCGAAATCAGAGGAGTAATCAACCATATCAACAAG
                      ____________________________________________________________
consensus             CCGTACAGTATGGGAGACAAGGACGTCGAAATCAGAGGAGTAATCAACCATATCAACAAG
 
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JMSF047H03-           GCAACTCAGGATATGATGGCCAGAGATCGAGGAATTTTGGTCCACCACAGGGTCCACCTC
                      ____________________________________________________________
consensus             GCAACTCAGGATATGATGGCCAGAGATCGAGGAATTTTGGTCCACCACAGGGTCCACCTC
 
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JMSF047H03-           AACAGAACATCACACCACAGGGTCCTCCCCCTCAACAGAACCAAGGGCCACTGCAAGGCC
                      ____________________________________________________________
consensus             AACAGAACATCACACCACAGGGTCCTCCCCCTCAACAGAACCAAGGGCCACTGCAAGGCC
 
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JMSF047H03-           ATTCACCTCAACAGTACTACAGCCAACCACAGGGTCCTCGACCTCAACAGACATATGGTC
                      ____________________________________________________________
consensus             ATTCACCTCAACAGTACTACAGCCAACCACAGGGTCCTCGACCTCAACAGACATATGGTC
 
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JMSF047H03-           AACAACACTTCCCTCAGCAGAATTACGGTCACCAGCAAAATCCTCTGCCTCGGCAGAACA
rJMSF042I05+                                                         CCTCGGCAGAACA
                      ____________________________________________________________
consensus             AACAACACTTCCCTCAGCAGAATTACGGTCACCAGCAAAATCCTCTGCCTCGGCAGAACA
 
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JMSF047H03-           TTGGCCCAGAGCACAGTCAGCCTCAGCAGACCTATGGCTCACCTCAGACTCCACCTTCCC
rJMSF042I05+          TTGGCCCAGAGCACAGTCAGCCTCAGCAGACCTATGGCTCACCTCAGACTCCACCTTCCC
                      ____________________________________________________________
consensus             TTGGCCCAGAGCACAGTCAGCCTCAGCAGACCTATGGCTCACCTCAGACTCCACCTTCCC
 
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JMSF047H03-           AACAGAGTTATGGTTCCCAACAGAACTATGGTGCACCAGG                    
rJMSF042I05+          AACAGAGTTATGGTTCCCAACAGAACTATGGTGCACCAGGAAGTCAAAGAGGTTCTATGC
rJMSF047H03+                                             CCAGGAAGTCNAAGAGGTTCTATGC
                      ____________________________________________________________
consensus             AACAGAGTTATGGTTCCCAACAGAACTATGGTGCACCAGGAAGTCAAAGAGGTTCTATGC
 
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rJMSF042I05+          CAGTGCGCAATGGCCCTGGTGGATTGGATAACTATCAGGGCAGAACTCAAGATCAGGTTC
rJMSF047H03+          CAGTGCGCAATGGCCCTGGTGGATTGGATAACTATCAGGGCAGAACTCAAGATCAGGTTC
                      ____________________________________________________________
consensus             CAGTGCGCAATGGCCCTGGTGGATTGGATAACTATCAGGGCAGAACTCAAGATCAGGTTC
 
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rJMSF042I05+          TTTCTCAAACTGATCAAAGTGGTTATGCACCTAGGGAGCAGAGGGCCTTCCAAGGAGGGA
rJMSF047H03+          TTTCTCAAACTGATCAAAGTGGTTATGCACCTAGGGAGCAGAGGGCCTTCCAAGGAGGGA
                      ____________________________________________________________
consensus             TTTCTCAAACTGATCAAAGTGGTTATGCACCTAGGGAGCAGAGGGCCTTCCAAGGAGGGA
 
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rJMSF042I05+          ATCAAAACTATGGCCAAACCCAAGGT-GACATTTTGGACAAGGACCAACTGGAAGCCAGT
rJMSF047H03+          ATCAAAACTATGGCCAAACCCAAGGTGGACATTTTGGACAAGGACCAACTGGAAGCCAGT
                      ____________________________________________________________
consensus             ATCAAAACTATGGCCAAACCCAAGGTGGACATTTTGGACAAGGACCAACTGGAAGCCAGT
 
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rJMSF042I05+          GGCGTGGAACTGGACCTTCCTCTGGGCAGAACTACCCAAATTACGGAGATCAGCAATTCC
rJMSF047H03+          GGCGTGGAACTGGACCTTCCTCTGGGCAGAACTACCCAAATTACGGAGATCAGCAATTCC
                      ____________________________________________________________
consensus             GGCGTGGAACTGGACCTTCCTCTGGGCAGAACTACCCAAATTACGGAGATCAGCAATTCC
 
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rJMSF042I05+          CGCCCTCGGAACAGAGGAACGTTCAAGGGGATGAAAGGTACCAAGCACCCATGTGGAGGG
rJMSF047H03+          CGCCCTCGGAACAGAGGAACGTTCAAGGGGATGAAAGGTACCAAGCACCCATGTGGAGGG
                      ____________________________________________________________
consensus             CGCCCTCGGAACAGAGGAACGTTCAAGGGGATGAAAGGTACCAAGCACCCATGTGGAGGG
 
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rJMSF042I05+          CAGGAACTGACCAAGGAAGAAATTAAAGATTTTCCAAGAATTCAAACCTTATGATTGCAA
rJMSF047H03+          CAGGAACTGACCAAGGAAGAAATTAAAGATTTTCCAAGAATTCAAACCTTATGATTGCAA
                      ____________________________________________________________
consensus             CAGGAACTGACCAAGGAAGAAATTAAAGATTTTCCAAGAATTCAAACCTTATGATTGCAA
 
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rJMSF042I05+          AATGAAATTTTTAAGTGTTTAAGATGGTATATCTGTTATAGCCTGTTTAAAGGAGCCCGA
rJMSF047H03+          AATGAAATTTTTAAGTGTTTAAGATGGTATATCTGTTATAGCCTGTTTAAAGGAGCCCGA
                      ____________________________________________________________
consensus             AATGAAATTTTTAAGTGTTTAAGATGGTATATCTGTTATAGCCTGTTTAAAGGAGCCCGA
 
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rJMSF042I05+          TGGATGCAGCATCTTGATGAGAGTTATGTAAAATCATGGCAATGCTTCCATTATCATTTT
rJMSF047H03+          TGGATGCAGCATCTTGATGAGAGTTATGTAAAATCATGGCAATGCTTCCATTATCATTTT
                      ____________________________________________________________
consensus             TGGATGCAGCATCTTGATGAGAGTTATGTAAAATCATGGCAATGCTTCCATTATCATTTT
 
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rJMSF042I05+          GGTGGAGTTTTAGATGGAATAGCGGTGTTCTCAAGAATAATGCCTATTAGTTCTATGGAT
rJMSF047H03+          GGTGGAGTTTTAGATGGAATAGCGGTGTTCTCAAGAATAATGCCTATTAGTTCTATGGAT
                      ____________________________________________________________
consensus             GGTGGAGTTTTAGATGGAATAGCGGTGTTCTCAAGAATAATGCCTATTAGTTCTATGGAT
 
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rJMSF042I05+          TTTTCTAAGTCTTGAGCTTGTGAATTATAGACATTCTTAACTATAGTAAGCAATTATAGA
rJMSF047H03+          TTTTCTAAGTCTTGAGCTTGTGAATNATAGACATTCTTAACTATAGTAAGCAATTATAGA
                      ____________________________________________________________
consensus             TTTTCTAAGTCTTGAGCTTGTGAATTATAGACATTCTTAACTATAGTAAGCAATTATAGA
 
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rJMSF042I05+          CTAGTAGAATTTTGCTTCCAAACGACTTCTTGA                           
rJMSF047H03+          CTAGTAGAATTTTGCTTCCAAACGACTTCTTGACTGGTATTAATTAAATGTCCATAAATA
                      ____________________________________________________________
consensus             CTAGTAGAATTTTGCTTCCAAACGACTTCTTGACTGGTATTAATTAAATGTCCATAAATA
 
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rJMSF047H03+          GAAGTGTACTAAGTTGAATATTTTGTTATAATTGTTAGAAATGTACGAAGTAGTAGATTA
                      ____________________________________________________________
consensus             GAAGTGTACTAAGTTGAATATTTTGTTATAATTGTTAGAAATGTACGAAGTAGTAGATTA