Contig 014109:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002I13Sequence454012168 (2)ref|XP_009623304.1|9e-07PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230698014109 (3)emb|CDP10226.1|5e-108unnamed protein product [Coffea canephora]
JMSF034P19Sequence182014109 (3)ref|XP_006473994.1|2e-19PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230
JMSF047E10Sequence706012168 (2)ref|XP_009623304.1|6e-09PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230770014109 (3)emb|CDP10226.1|8e-117unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF047E10+ AGCACAGACACCTGGGAACTGCAGGACGACAGTAATGGTATTCAGAATGT
                      ____________________________________________________________
consensus AGCACAGACACCTGGGAACTGCAGGACGACAGTAATGGTATTCAGAATGT
 
. : . : . : . : . : . :
rJMSF002I13+ GGTCCGAGGGATTGTTAACCACTTGGGTATTCAGACATAAAATTGCACTTGGCACGGC
rJMSF047E10+ CGGGTCCGAGGGATTGTTAACCACTTGGGTATTCAGACATAAAATTGCACTTGGCACGGC
                      ____________________________________________________________
consensus CGGGTCCGAGGGATTGTTAACCACTTGGGTATTCAGACATAAAATTGCACTTGGCACGGC
 
. : . : . : . : . : . :
rJMSF002I13+ AAGAGCCCTCGCGTTTCTCCATCATGGCTGCTCGCCTCCAATCATACACCGAGATGTCAA
rJMSF047E10+ AAGAGCCCTCGCGTTTCTCCATCATGGCTGCTCGCCTCCAATCATACACCGAGATGTCAA
                      ____________________________________________________________
consensus AAGAGCCCTCGCGTTTCTCCATCATGGCTGCTCGCCTCCAATCATACACCGAGATGTCAA
 
. : . : . : . : . : . :
rJMSF002I13+ GGCTAGCAGCGTGTATCTTGACTGTAGCCTCGAGCCCAGGCTTTCTGATTTTGGACTAGC
rJMSF047E10+ GGCTAGCAGCGTGTATCTTGACTGTAGCCTCGAGCCCAGGCTTTCTGATTTTGGACTAGC
                      ____________________________________________________________
consensus GGCTAGCAGCGTGTATCTTGACTGTAGCCTCGAGCCCAGGCTTTCTGATTTTGGACTAGC
 
. : . : . : . : . : . :
rJMSF002I13+ TAAAATCTTCGGGAATGGTCTTGAAGATGAGATTGCTCGGGGTTCACCTGGATACATACC
rJMSF047E10+ TAAAATCTTCGGGAATGGTCTTGAAGATGAGATTGCTCGGGGTTCACCTGGATACATACC
                      ____________________________________________________________
consensus TAAAATCTTCGGGAATGGTCTTGAAGATGAGATTGCTCGGGGTTCACCTGGATACATACC
 
. : . : . : . : . : . :
rJMSF002I13+ ACCCGAGTTTCTCCAACCAGCTGAGACAAGCTCCCCTAAAACCCCAACTCCAAAATCCGA
rJMSF047E10+ ACCCGAGTTTCTCCAACCAGCTGAGACAAGCTCCCCTAAAACCCCAACTCCAAAATCCGA
                      ____________________________________________________________
consensus ACCCGAGTTTCTCCAACCAGCTGAGACAAGCTCCCCTAAAACCCCAACTCCAAAATCCGA
 
. : . : . : . : . : . :
rJMSF034P19+ TGGTAAAAAACCCNNTGGAGA
rJMSF002I13+ TGTCTATGGATTTGGTGTCATTCTCTTCGAGCTACTAACTGGTAAAAAACCCGTTGGAGA
rJMSF047E10+ TGTCTATGGATTTGGTGTCATTCTCCTCGAGCTACTAACTGGTAAAAAACCCGTTGGAGA
                      ____________________________________________________________
consensus TGTCTATGGATTTGGTGTCATTCTCTTCGAGCTACTAACTGGTAAAAAACCCGTTGGAGA
 
. : . : . : . : . : . :
rJMSF034P19+ TGATTACCCAGAAGAGAAAGACGGGAATTTGGTTATTTGGGTGAGAAGNTTANTGAGGAA
rJMSF002I13+ TGATTACCCAGAAGAGAAAGACGGGAATTTGGTTATTTGGGTGAGAGGATTAGTGAGGAA
rJMSF047E10+ TGATTACCCAGAAGAGAAAGACGGGAATTTGGTTATTTGGGTGAGAGGATTAGTGAGGAA
                      ____________________________________________________________
consensus TGATTACCCAGAAGAGAAAGACGGGAATTTGGTTATTTGGGTGAGAGGATTAGTGAGGAA
 
. : . : . : . : . : . :
rJMSF034P19+ AAACCAGGGATTAAGANCTANTGATCCAAAAATCCNTGGANCAGCACCAGAAACACAGAT
rJMSF002I13+ AAACCAGGGATTAAGAGCTATTGATCCAAAAATCCATGGAACAGCACCAGAAACACAGAT
rJMSF047E10+ AAACCAGGGATTAAGAGCTATTGATCCAAAAATCCATGGAACAGCACCAGAAACACAGAT
                      ____________________________________________________________
consensus AAACCAGGGATTAAGAGCTATTGATCCAAAAATCCATGGAACAGCACCAGAAACACAGAT
 
. : . : . : . : . : . :
rJMSF034P19+ GGAAGAAGCCNTGAAGATTGGTTATNTANGCACNGCAGACT
rJMSF002I13+ GGAAGAAGCCTTGAAGATTGGTTATTTATGCACAGCAGACTCTCCTTCAAAGCGGCCAAG
rJMSF047E10+ GGAAGAAGCCTTGAAGATTGGTTATTTATGCACAGCAGACTCTCCTTCAAAGCGGCCAAG
                      ____________________________________________________________
consensus GGAAGAAGCCTTGAAGATTGGTTATTTATGCACAGCAGACTCTCCTTCAAAGCGGCCAAG
 
. : . : . : . : . : . :
rJMSF002I13+ TATGCAGCAGGTAGTTGGACTTCTCAAGGATATCGAGAGCATTACAAAGCAATGAGGACC
rJMSF047E10+ TATGCAGCAGGTAGTTGGACTTCTCAAGGATATCGAGAGCATTACAAAGCAATGAGGACC
                      ____________________________________________________________
consensus TATGCAGCAGGTAGTTGGACTTCTCAAGGATATCGAGAGCATTACAAAGCAATGAGGACC
 
. : . : . : . : . : . :
rJMSF002I13+ GATCGAGATCTAAGTAATCTCGACTTCATAATCCTCCTCATCTGTCTGCTTTCCATTTTG
rJMSF047E10+ GATCGAGATCTAAGTAATCTCGACTTCATAATCCTCCTCATCTGTCTGCTTTCCATTTTG
                      ____________________________________________________________
consensus GATCGAGATCTAAGTAATCTCGACTTCATAATCCTCCTCATCTGTCTGCTTTCCATTTTG
 
. : . : . : . : . : . :
rJMSF002I13+ AGTTCCCATAGCGGGGACTGTACAGTACTCCAAGCTTTTT
rJMSF047E10+ AGTTCCCATAGCGGGGACTGTACAGTACTCCAAGCTTTTTGTTTGCCATGTTTCTCATAT
                      ____________________________________________________________
consensus AGTTCCCATAGCGGGGACTGTACAGTACTCCAAGCTTTTTGTTTGCCATGTTTCTCATAT